| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0855 |
|---|
| Symbol | rplB |
|---|
| ID | 4709191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 924925 |
|---|
| End bp | 925749 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639855314 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_001002433 |
|---|
| Protein GI | 121997646 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.584822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTAG TCAAGAGCAA GCCGACGTCT CCGGGCCGGC GTTTCGTCGT CAAGACGAAG
GACGCCCGGC TGCACCAGGG TGGCCCCTAC GAGCCGCTGG TGGTGCAGAA GAGCAAGACC
GGCGGGCGCA ACAGCAACGG TCGGATCACC ACCCGTCATC GCGGGGGGGG CCACAAGCAG
CGTTACCGCC AGATCGACTT CAAGCGGAAC AAGACCGGTG TCCCGGGCAA GGTCGAGCGA
CTCGAATACG ACCCGAATCG TTCGGCGAAT ATCGCTCTGG TCCTTTATCA AGACGGCGAG
AGAAGGTATA TTATCGCGCC TCGTGGCGTT GAACCCGGCT CGCCGATCCA GAGCGGGCGC
GACGCCGCCA TCAAGCCGGG CAACGCCCTG CCGCTGCGTA ACATCCCGGT CGGTACGCAG
GTGCACTGCG TCGAGCTCAA GCCCGGCAAG GGTGCGCAGC TCGCTCGCTC CGCCGGAGCC
GGTGTGCAGG TCGTCGCCCG CGAGAGTGGC ATGGCGACGC TGCGCCTTCG CTCCGGCGAG
ATGCGCCGTG TGCCCGCCGA CTGCATGGCG ACCGTAGGCG AAGTCGGCAA CGCCGAGCAC
AGTCTGCGCA ACCTCGGCAA GGCCGGGGCC AAGCGCCACC TGGGCGTGCG ACCGACGGTC
CGTGGTGTCG CCATGAACCC GGTTGATCAC CCGCACGGCG GCGGCGAGGG CCGCACCGCA
GGCGGGCGTC ACCCGGTCTC GCCGTGGGGT ATGCCCACCA AGGGGCATAA GACCCGCAAG
AACAAGCGTA CCGATAAGTA CATCGTGCGC CGACGGAAGC GTTGA
|
|---|
| Protein sequence | MALVKSKPTS PGRRFVVKTK DARLHQGGPY EPLVVQKSKT GGRNSNGRIT TRHRGGGHKQ
RYRQIDFKRN KTGVPGKVER LEYDPNRSAN IALVLYQDGE RRYIIAPRGV EPGSPIQSGR
DAAIKPGNAL PLRNIPVGTQ VHCVELKPGK GAQLARSAGA GVQVVARESG MATLRLRSGE
MRRVPADCMA TVGEVGNAEH SLRNLGKAGA KRHLGVRPTV RGVAMNPVDH PHGGGEGRTA
GGRHPVSPWG MPTKGHKTRK NKRTDKYIVR RRKR
|
|---|
| |