| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0851 |
|---|
| Symbol | rplP |
|---|
| ID | 4709666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 923144 |
|---|
| End bp | 923557 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639855310 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_001002429 |
|---|
| Protein GI | 121997642 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.828533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAGC CGAAACGGAC CAAGTACCGC AAGAAGCAAA AGGGCCGCTG CTCGGGCCTC
GCGACCCGCG GTGATCGCGT GAGCTTCGGC GAGTTCGGCC TCAAGGCAAC CACCCGCGGG
CCGATCACCT CGCGGCAGAT CGAGGCGGCG CGGCGTGCCA TCAACCGCTA CATCCGCCGG
GGCGGCAAGA TCTGGATCCG GGTCTTCCCG GATAAGCCGG TCACCGAGAA GCCGCTCGAG
GTCCGGATGG GTAAGGGCAA GGGCAACGTG GACCACTGGT GTGAGCCGAT CGCGCCCGGG
CGCGTCCTCT ACGAGCTGGA AGGTGTGTCC GAGGAAGTCG CCCGCGAGGC CTTCCGGCGC
GCGGCGGCCA AGCTGCCGGT GAAGACCACC TTCGTGAACC GGACGGTGAT GTGA
|
|---|
| Protein sequence | MLQPKRTKYR KKQKGRCSGL ATRGDRVSFG EFGLKATTRG PITSRQIEAA RRAINRYIRR
GGKIWIRVFP DKPVTEKPLE VRMGKGKGNV DHWCEPIAPG RVLYELEGVS EEVAREAFRR
AAAKLPVKTT FVNRTVM
|
|---|
| |