Gene Hhal_0843 details

Gene Information

• Locus tag: Hhal_0843
• Symbol: rplF
• ID: 4710956
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 920099
• End bp: 920632
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639855302
• Product: 50S ribosomal protein L6
• Protein accession: YP_001002421
• Protein GI: 121997634
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.602028
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAGAG TCGCAAAGGC ACCCGTGGAG GTCCCCTCCG GCGTTGAGGT GACGCTCCAG 
GGCAACGACA TTCAGGTCAA GGGCCCCAAG GGCCAGATGG CGTGGAGCTG CCACCGCCTG 
GTTTCGCTGA ACCAGGAAGA AGGCACGCTC ACCTTCGAGC CCCGGCAGCA GAGCACCCGT 
GCGGTGGCGC TGACCGGTAC CACGCGGGCC TTGGTGCAGA ACATGGTCAC CGGCGTCAGC 
GAGGGCTTCG AGCGCCGCCT CGAGCTCAAG GGCGTCGGCT ACCGCGCGCA GGTCCAGGGC 
AGCACCCTGA ACCTGACGCT CGGTTTCTCG CACCCGGTGC ACTACGAGAT CCCGGAGGGC 
GTCACGATCG AGTGCCCCTC GCAGACGGAG GTCGTGGTCA AGGGCGCCGA CAAGCAGCAG 
GTTGGCCAGG TGGCCGCCCA GATTCGCGGG TACCGTCCGC CGGAGCCCTA CAAGGGCAAG 
GGCGTGCGCT ACGCCGACGA GCGGGTGGTC CTCAAAGAAG CCAAGAAGAA GTAG 

 

Protein sequence

MSRVAKAPVE VPSGVEVTLQ GNDIQVKGPK GQMAWSCHRL VSLNQEEGTL TFEPRQQSTR 
AVALTGTTRA LVQNMVTGVS EGFERRLELK GVGYRAQVQG STLNLTLGFS HPVHYEIPEG 
VTIECPSQTE VVVKGADKQQ VGQVAAQIRG YRPPEPYKGK GVRYADERVV LKEAKKK