Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0840 |
Symbol | rpmD |
ID | 4711051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 919017 |
End bp | 919205 |
Gene Length | 189 bp |
Protein Length | 62 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639855299 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001002418 |
Protein GI | 121997631 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATC AGAAGAAGCT CCAGGTAACG CTGCGGCGCA GCGTCCACGG CCGGCTGCAG AAGCACCGTC AGTGTGTGCG CGGGCTGGGC CTGCGCCGGA TGCACCAGAC CGTCCTGGTC GACGACACCC CGGAGAATCG CGGGATGATC CGGAAGGTGT CTTATATGCT GGAAGTTCAG GAGGCGTAA
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Protein sequence | MANQKKLQVT LRRSVHGRLQ KHRQCVRGLG LRRMHQTVLV DDTPENRGMI RKVSYMLEVQ EA
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