| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0838 |
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| Symbol | secY |
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| ID | 4710303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 917231 |
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| End bp | 918535 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639855297 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001002416 |
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| Protein GI | 121997629 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACGTC TCACCGAGGT TCGCCAGCGT CTGCTCTTCG TACTGCTCGC GCTGATCATC
TATCGGATCG GTACCCACAT CACCATCCCG GGTATCGACC CCGCTGCGCT CGAGCAGATG
GTCGACCAGC AACGCGGCAC CATCCTGGAG ATGTTCAACA TGTTCGCCGG CGGGGCGCTG
GAGCGGCTGT CCATCTTCGC CCTCGGCGTC ATGCCCTACA TCTCGGCGGC GATCATCATG
CAGCTGCTTA CGGCGGTGGT GCCGTCGCTC GAGCGGCTCA AGAAGGAGGG CGAGGCCGGC
CGGCGCAAGA TCACGCAGTA CACGCGTTAC GGCACCCTCG GCCTGGCCAC CTTCCAGGGT
ATCGGCATCA GCATCGCGTT GCAGGGGCAG GGCGTGGCCG CCATGCCCGG GCCGGCGTTC
GTGTTCATCT CCACGGTGAC GCTGGCCACC GGCGTGATCT TCCTGATGTG GCTCGGTGAG
CAGATCACCG AGCGAGGCAT CGGCAACGGC ATCTCGATCA TTATCTTCGC CGGCATCGTC
GCCGGGCTGC CGGGCGCCCT CGGCGGCACG CTGGAGCTGC AGCGTACCGG TGAGCTGGGC
ACCGCGACGA TCCTGCTGCT GCTCATGATG GCCGCGGCGG TCACCGCCTT CATCGTCTTC
GTCGAGCGGG GACAGCGGCG GATCACCGTG CAGTACGCCA AGCGCCAGCA GGGGCGCAAG
ATGTATGCGG CGCAGCAGAG CCACCTGCCG CTGAAGCTCA ACATGGCCGG CGTGATCCCG
CCGATCTTCG CCTCCAGCAT CATCCTCTTC CCGGCGACGG TCGGGCAGTG GTTCGGCGAT
GCCGAGGGGC TGGGCTTCAT CGGCGACATC GCCGCGACGC TGTCGCCGGG CCAGCCGGTC
TACGTGGCCC TGTATGCCGC GGCGATCATC TTCTTCTGCT TCTTCTACAC GGCGCTGGTG
TTCAACTCGC GGGACACCGC CGACAACCTG AAGAAGTCCG GGGCGTTCAT CCCGGGGATC
CGTCCCGGTG AGCAGACGTC CCGCTACATC GATCAGGTGC AGAGCCGGCT GACGTTCGTC
GGCGCGCTGT ACATCACGGC CGTCTGTCTG ATGCCGGAGT TCCTGATCCT GTACTGGAAC
GTGCCGTTCT ACTTCGGCGG CACCTCGCTG TTGATCAGCG TCATTGTGGT CATGGACTTC
ATGGCGCAGC TGCAGTCGCA CTTGGTCTCG CACCAGTACG AGCCGCTGAT GAAGAAGGCC
AATCTCAAGG GGCACACCCG GCCTGGCGGC GGGATGCTGC GCTGA
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| Protein sequence | MGRLTEVRQR LLFVLLALII YRIGTHITIP GIDPAALEQM VDQQRGTILE MFNMFAGGAL
ERLSIFALGV MPYISAAIIM QLLTAVVPSL ERLKKEGEAG RRKITQYTRY GTLGLATFQG
IGISIALQGQ GVAAMPGPAF VFISTVTLAT GVIFLMWLGE QITERGIGNG ISIIIFAGIV
AGLPGALGGT LELQRTGELG TATILLLLMM AAAVTAFIVF VERGQRRITV QYAKRQQGRK
MYAAQQSHLP LKLNMAGVIP PIFASSIILF PATVGQWFGD AEGLGFIGDI AATLSPGQPV
YVALYAAAII FFCFFYTALV FNSRDTADNL KKSGAFIPGI RPGEQTSRYI DQVQSRLTFV
GALYITAVCL MPEFLILYWN VPFYFGGTSL LISVIVVMDF MAQLQSHLVS HQYEPLMKKA
NLKGHTRPGG GMLR
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