Gene Hhal_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0836 
SymbolrpsM 
ID4709254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp916580 
End bp916939 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content68% 
IMG OID639855295 
Product30S ribosomal protein S13 
Protein accessionYP_001002414 
Protein GI121997627 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGAA TCGCAGGAAT CAACATACCG ACACACAAGC ATGCGTGGGT CGCGCTGACC 
TCGATCTACG GGATCGGCCG CACGCGTGCA CTGAGCATCT GCAACGCGGC CGGCGTGCCG
CACGACCGAC GCGTCCGCGA CCTCAACGAC GCCGAGGTCG AGGCGCTGCG GCAGGAAGTT
GGCAACTACG TCATCGAGGG CGACCTGCGT CGCTCGGTCG CGATGGACAT CAAGCGCCTG
ATGGACCTCG GCTGCTACCG AGGCATGCGG CATCGCCGCG GCCTGCCGGT ACGCGGGCAA
CAGACGCAGA CCAACGCGCG TACGCGCAAG GGTCCGCGTC GGGGCCCCGC CAGCCGCTGA
 
Protein sequence
MARIAGINIP THKHAWVALT SIYGIGRTRA LSICNAAGVP HDRRVRDLND AEVEALRQEV 
GNYVIEGDLR RSVAMDIKRL MDLGCYRGMR HRRGLPVRGQ QTQTNARTRK GPRRGPASR