| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0827 |
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| Symbol | |
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| ID | 4709281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 908178 |
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| End bp | 909446 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639855286 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001002405 |
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| Protein GI | 121997618 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG CGCACAAGAC CGGAGCCATC TCCCCCCTGC TCAAGCAGTC CAGCGACGTC
GTCGCCGAAC GCGGCGAAGG CGCCTACATC ATCGGCACCG ACGGGCGCCG CTATCTGGAC
TTCACCTCGG GCATCGGCGT CACCGCCACC GGGCACTGCC ACCCCAAGGT GGTCGAGGCC
GCCCAGCGCC AGGCCGCCAC CCTGGTCCAC GGCCAGTACG CCATCGTTCG CCATCCGCCC
ATGCTCCGCC TCGCCGAGCG CCTCGGTGAG ATCATGCCCG GAGCCATCGA CCGCATCTTC
TTCTCCAACG CCGGCACCGA GGCGTGCGAG GGCGCCCTGC GCCTGGCCCG CCAGGCCACC
GGCCGGCCCA ACATCATCGT CTTCCAGGGG GGCTTCCATG GCCGTACCAT GGGCTCGCTG
TCGATGACCT CCTCCAGCGT CGGCCTGCGC GCCGGCGTGC AGCCGATGAT GGGCGGCACG
GTGTTCGCGC CGTTCCCCAA TGCCCGGCGG TACGGCTGGG AGGACGAAGA GACCGCCGAG
TTCTGCCTGC GCGAGCTCGA CCACATCCTC GCCACGCAGT CGATGCCGGC CGAGTCGGCG
GCGTTCTTCG TCGAGCCGAT CCAGGGCGAG GCCGGCTACA TCCCCGCCGG GCGGACCTTC
ATGCAGGGCC TGTGCGAGCG GGCCGACCGC CACGGCATGC TGCTCATCGC CGACGAGGTG
CAGAGCGGCT ACGGGCGCAG CGGCGCCTTC TGGGCGCACA GCCACTTCGA CGTGCAGCCG
GACATGGTGG TCACCGCCAA GGGGCTGGCC AGCGGCTTCC CGCTCTCGGC GGTGGCAGCG
CCGCAGGCGA TCATGGAGCG CGGTTGGCCC GCCTCCCAGG GGGGCACCTA CGGCGGCAAC
GCGGTCGCCT GTGCCGCCGC GCTGGCGTCG CTGGAGGTCA TCGAAGAGGA AGGCCTGGTG
GAGAACGCCC GCGAGCAGGG CGCACACCTG CGCAGCCGGC TCGACGCCCT GTGTGCCGAG
GAGCCGGCCA TCGCCCACGT CCAGGGCATG GGCCTGATGC ACGGCACCGA GTTGGTGGAC
GAGCAGGGCC GCCCGGACGG CGATCGCGCC GCGCGGGTGC TCAAGGCCAT GGAAGAGCGC
GATGTGCTGA TGATTCGCTG CGGGCCGCAG GGACAGATCG TGCGCTGGCT GCCGCCGCTG
ATCATCCGCC GCGAGGAGGT CGATCGCGCG GTGGATGCCT TTGCCGAGGC GTTGCGCGCC
ACGGCCTGA
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| Protein sequence | MSDAHKTGAI SPLLKQSSDV VAERGEGAYI IGTDGRRYLD FTSGIGVTAT GHCHPKVVEA
AQRQAATLVH GQYAIVRHPP MLRLAERLGE IMPGAIDRIF FSNAGTEACE GALRLARQAT
GRPNIIVFQG GFHGRTMGSL SMTSSSVGLR AGVQPMMGGT VFAPFPNARR YGWEDEETAE
FCLRELDHIL ATQSMPAESA AFFVEPIQGE AGYIPAGRTF MQGLCERADR HGMLLIADEV
QSGYGRSGAF WAHSHFDVQP DMVVTAKGLA SGFPLSAVAA PQAIMERGWP ASQGGTYGGN
AVACAAALAS LEVIEEEGLV ENAREQGAHL RSRLDALCAE EPAIAHVQGM GLMHGTELVD
EQGRPDGDRA ARVLKAMEER DVLMIRCGPQ GQIVRWLPPL IIRREEVDRA VDAFAEALRA
TA
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