Gene Hhal_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0789 
Symbol 
ID4710316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp874405 
End bp874791 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content63% 
IMG OID639855248 
ProductPilT domain-containing protein 
Protein accessionYP_001002367 
Protein GI121997580 
COG category[S] Function unknown 
COG ID[COG3744] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.513324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCTGC TCCTTGATAC CCACATCCTG CTTTGGGCCG CCGCAGATTC CCCCCGGCTC 
TCCCAGGAAG CCAGGGAACT CCTCCTGGAT CCGGAGCATC AGCTCGCCTA CAGCGCTGCA
AGCCTATGGG AGATCACCAT CAAGCGCGGA CTGGGCCGTG ACGACTTCCG AGTGGAACCG
TCGGTGCTCA GGCGCGAGCT CATGGAACAT GGCTATGAGG AGCTGGCCAT CCGCGGCCCT
CACACGCTCG CCGTGGGCAA CCTCCCGGAC GTGCACAAAG ACCCGTTTGA TCGGATGCTC
GTTGCCCAGG CCCAGGTCGA GGGCTACACG TTGCTGACCC GTGACCATCA AGTCGCACAG
TATCCGGGAC CGATCCGGCT GGTTTAG
 
Protein sequence
MHLLLDTHIL LWAAADSPRL SQEARELLLD PEHQLAYSAA SLWEITIKRG LGRDDFRVEP 
SVLRRELMEH GYEELAIRGP HTLAVGNLPD VHKDPFDRML VAQAQVEGYT LLTRDHQVAQ
YPGPIRLV