Gene Hhal_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0782 
Symbol 
ID4710345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp869031 
End bp869855 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content51% 
IMG OID639855243 
Productglycosyl transferase family protein 
Protein accessionYP_001002362 
Protein GI121997575 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACAG ACGTTTCTAT ATTACTCGCC ACTTATTCCG GCGACTCCCC AGAACTTTTA 
CATAAGAGCC TCGAAAGCCT TGAGCACCAG ACCTTGCCGC CTGACGAGGT CATATTAGTT
GAATCAGGCG CCCTGACACA AGCGCAGAGA GAGGTCATCG AAGAAAAACA GAAACAACTT
CCACTTCGCC GAGTCCTGAA AGAAAAAAAC GAGGGGCTGG GCGCTGCTTT AGCCGAAGGC
CTCAAGCATG CGCGCTGTGA ATGGGTTGCA AGAATTGACG CTGACGATAT TGCCTTCACG
GACCGACTGG AACGCCAAAA CCAACACCTG ATTAAAAACC CAGGCATTGA CATTCTCGGA
GGAGGCGCTG TAGAAATTGA TTACGATGGA AATATTGGAA AAACCAGGGT CATGCCAACA
AAGCATGACA AGATTTCTAA AACAATCTGG GCCTGCCCAG TCATTCACCC TAGCGTTACT
TTTCGCCGGA GAAGAATTTT AGAGGTAGGC AACTACAACC CAAGCTTACC CAGAGGCCAA
GACTACGAGC TCTGGTTCCG TGCTTTGCAC AACGGGCTAA GATTTGAAAA CCTTCCCGAC
CCCGTCGTCT ACTACCGATT TTCCCAAGAC AATATTCGGC GCCAGCCTCC CCGTGAGTGT
TTTGTCCAGG GGCAAATTGG TTGGCGTGGC TGCCGCATGC TGGGTTTACC CTTATGGCAG
CATTTGGCGG TTTGGTATCC CTTTGCTCGA AGCCTTCTTC CCCTGCCTTT GGCGGAAGCA
GCATATCGTT TTTCACAGAG GATTGATCCA CGGCTCGCAC GTTGA
 
Protein sequence
MQTDVSILLA TYSGDSPELL HKSLESLEHQ TLPPDEVILV ESGALTQAQR EVIEEKQKQL 
PLRRVLKEKN EGLGAALAEG LKHARCEWVA RIDADDIAFT DRLERQNQHL IKNPGIDILG
GGAVEIDYDG NIGKTRVMPT KHDKISKTIW ACPVIHPSVT FRRRRILEVG NYNPSLPRGQ
DYELWFRALH NGLRFENLPD PVVYYRFSQD NIRRQPPREC FVQGQIGWRG CRMLGLPLWQ
HLAVWYPFAR SLLPLPLAEA AYRFSQRIDP RLAR