Gene Hhal_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0780 
Symbol 
ID4710939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp866492 
End bp867601 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content60% 
IMG OID639855241 
Productglycosyl transferase, group 1 
Protein accessionYP_001002360 
Protein GI121997573 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.716964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA TCGCATACGT AGTATCTAGC CTTCCACCAT CCGGCCCGAC TACCCAGTTA 
CTTCACTTGC TAAAGAACCT CGACCGTGAC CGCTTCATGC CTCGTCTCGT TGTTTTATCA
CCTGAGCGCG GCAATCGCTC CGTGCGCTCC GAGCTTCCCT CTGATGTAGA GGTTCACTCG
CTCGATCTCG GTCGGCTATC AGCCGTCGGA CGCGGCGCGC GGGATCTTGA TCGGATTCTT
AAAAGGATTG ATCCCAAGAT CGTCCATACG AGCGGCGCAC GCCCGGATAG CTGGGTCTCT
CGTCTCACAG GGCAGTGGCG GCACCTAGCC ACCTTGCGTA ATGACCCGTT TCACGATTAC
CCGTCCCGCT TCGGGACTCT CCTTGGCCGA GTGCTTGCCT TCTGGCACTT GCGTGCTCTG
CGCCGGGTAC AGCAGCCTGT CGCGTGCTCC TCGGAGCTTG CCCGTACATA CTCCCGACAA
TACGGCATAT CAGCTGAAGC CATTCGGAAC GGAGTAGATA CTGACTACTT TCGACCTAGC
GACGACTTGC CGACCGAGCG CACGGACTTT CTTTGGGTGG GATCACTCAT CCCGCGCAAA
GAGCCGAATC TAATGATAGA CGCCTTCGGG CACGCGTTCC CACGAGATGT TCCCGGGCCA
TCGACCCCCG GCCTCTCCAT GCTTGGGGAT GGGCCGCTCA GCAACCAACT CGCGTCCGAG
GCCAATCACC CAGGAGTGAG CTTGAATGGC GCCGTCGACG ATCCCCTGCC CTACTACCAT
CAAGCGTCCT GGTTCGTGAG CACATCCCGC AGCGAGGGTC TGCCCAATGC CGCCCTGGAG
GCGCTCTCTT GCGGCCTTCC AGCACTATTG AGCGACATAC CGGCCCATCG AGAGCTCGCG
GAGCATGCCG GAGAAGCGGT GCGCTTGGTC CCGGAGCACA GCACGAAGGC TTGGGCAGAA
GCCCTGCATG CCGCCGCCTC GGATTGTAAC CTTCCCGCAC GACGGTACGC GGCTCGGCAG
GCTGCAGAGC GACACTTTTC CGCGAGGGCG ATGGCAAAGC AATACATGGC TCTCTACGAG
GACCTGATTC AGCAAGGGCG CTGCTCATGA
 
Protein sequence
MKTIAYVVSS LPPSGPTTQL LHLLKNLDRD RFMPRLVVLS PERGNRSVRS ELPSDVEVHS 
LDLGRLSAVG RGARDLDRIL KRIDPKIVHT SGARPDSWVS RLTGQWRHLA TLRNDPFHDY
PSRFGTLLGR VLAFWHLRAL RRVQQPVACS SELARTYSRQ YGISAEAIRN GVDTDYFRPS
DDLPTERTDF LWVGSLIPRK EPNLMIDAFG HAFPRDVPGP STPGLSMLGD GPLSNQLASE
ANHPGVSLNG AVDDPLPYYH QASWFVSTSR SEGLPNAALE ALSCGLPALL SDIPAHRELA
EHAGEAVRLV PEHSTKAWAE ALHAAASDCN LPARRYAARQ AAERHFSARA MAKQYMALYE
DLIQQGRCS