Gene Hhal_0770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0770 
Symbol 
ID4710680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp853130 
End bp854263 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content42% 
IMG OID639855231 
Productglycosyl transferase, group 1 
Protein accessionYP_001002350 
Protein GI121997563 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGATC TATTACTTAG GTGGCCCAAT AAAATGTGCA GCAATGTTAT TGTCTATTGT 
TCACACAGCG CAGCGTATAC AAGCTCACCC CTTAATGAAC ATTACATCTA TAGAAAATCA
CACTTCCCGA GAGAACAGCA CTACTACATT GCTATTAATA CATGCAAAGA AGAAAAGCGG
TTTAAGAGCA ACGAGAAATT CCGGATATTT GAATGCAAAG GAAACGATAA AAAACTCTTT
GAAGCACTTG AAAATATAAT CGATGCACAC ACCCCTTCAT CCAATATCAT AATTCATAAT
CATGACCCAA AAGCGACAAA AAAAATCGCA CATTTTATTA AAAAAAGACA CCACAATATC
CCTTTAGTGT ATACAATCCA TAACTCCTAT AACAAATTTA GTGCTCGGAA GAAATGCCTC
ACAAATCTAT CCATCCTGCA TAGTAGCAAA TCCGTATTCT GCGGGCGCGC GGCTTATGAA
GCATATCCTT ATCGACATCT TTTTAAACAA AAAACAACAT TCATACCGAA CGGGGTTGAT
ATAGATCGCA TTGACTCTAC TCTCAACCGC AGGGAAGGCA CATCAAAGCC GAACGATTAT
CGTATAAAAG TGGCGACAAT CGCGAAGAAC AATGGGCAGA AAAACCTGCC ACACCTACTG
AAGTTAGCTA GCGAACTGCC AAAAGAAATG CATCTTAGTG TAATTGGCCC GCTTTCCGAT
GAAGACAAAA ACAAAATCGA GTCTCTCGAC ACAAAGAACG TGAGGCACGT AGGTGTGCTT
GAGCGCGACG AAGCACTCCT CGCATTGTCA CAGAACGATA TATTTGCCTC TTCTTCTTTT
TACGAAGGCT TGCCTGTTGC GGTGCTTGAA GCTATGGCTA TTGGATTGCC CGTAGTGCTA
TCACGTATCC CCCCTCATTT AGAGCTAAGC TCTAAGGGAG ACGGACCCAT TGTTGCTGAA
TGCGACCTCT CTCTCTGGAA ACAAAAAATA CGCGAACTGA ACGAGCTGAA GCAACAAAAA
AATAATGGGC TACAGGAGTT GGGCCAACTA AACCGCAAAC TTGTGGAAGA GCACTTTAGC
TTGGCAGCAA TGCACAAAGC TTACAGTTCT GTTTATAAGG AATTACTCTA TTAA
 
Protein sequence
MQDLLLRWPN KMCSNVIVYC SHSAAYTSSP LNEHYIYRKS HFPREQHYYI AINTCKEEKR 
FKSNEKFRIF ECKGNDKKLF EALENIIDAH TPSSNIIIHN HDPKATKKIA HFIKKRHHNI
PLVYTIHNSY NKFSARKKCL TNLSILHSSK SVFCGRAAYE AYPYRHLFKQ KTTFIPNGVD
IDRIDSTLNR REGTSKPNDY RIKVATIAKN NGQKNLPHLL KLASELPKEM HLSVIGPLSD
EDKNKIESLD TKNVRHVGVL ERDEALLALS QNDIFASSSF YEGLPVAVLE AMAIGLPVVL
SRIPPHLELS SKGDGPIVAE CDLSLWKQKI RELNELKQQK NNGLQELGQL NRKLVEEHFS
LAAMHKAYSS VYKELLY