Gene Hhal_0738 details

Gene Information

• Locus tag: Hhal_0738
• ID: 4711358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 827023
• End bp: 827727
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639855202
• Product: peptidase C39, bacteriocin processing
• Protein accession: YP_001002321
• Protein GI: 121997534
• COG category: [R] General function prediction only
• COG ID: [COG3271] Predicted double-glycine peptidase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.772162
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGCC ACGCCACGCC ACTGGCCACG CTCGGCGCCC TGGCCTGCCT GGCCCTGGCC 
ACCCCGGCAC CGGCCCAGGC CGCCGGGCTA CCCATCCCGC ACCTCGGCGG CGGACACCAC 
GTGGTCGTCG AGAGCCTGCA GTCGGTCCGC TTCCGGGGCG TCGAACGCCA GGCCCTGGAC 
TACAGCTGCG GCTCGGCGGC GGTGGCCACC CTGCTCAGCT ACCACTACGA CCACTCGGTG 
GGCGAGCCCG AGGTCTTCGC CGGCATGTTC GCTGCCGCGG ATCAGCAGCG GGTGCGCACC 
GATGGCTTCT CCATGCTCGA CATGCAGCGC TACCTGGCCG AGCTGGGCTA CCGCGCCGAC 
GGCTTCAACC TCACCCTCGA GCAGGTAGCG GCGCTGCGCA TCCCGAGCAT CGTGCTGATC 
GACACCGGCG GCTACCTGCA CTTCGTGGTG ATCAAGGGCA TCCGCGACGG CCAGGTCCTC 
GTCGGCGACC CGGCCATGGG GCTGCGGGCC TACAACGCCG AGACCTTCAA GCAGCTGCGC 
CGCGGCCCGC TGCTGGTCAT CCGCGACCGC CACGACCTGG CGCAGCTCAC CTTCAACCCC 
GACCGGGCCT GGGCCGTACA GACCCGCCCG CCGTTCGAGC ACGCCCGCGA GCACCAGGGG 
CTGAGCGACT TTACGCGCAA CCTGCGCCGA CCGGGGGACT GGTGA 

 

Protein sequence

MNRHATPLAT LGALACLALA TPAPAQAAGL PIPHLGGGHH VVVESLQSVR FRGVERQALD 
YSCGSAAVAT LLSYHYDHSV GEPEVFAGMF AAADQQRVRT DGFSMLDMQR YLAELGYRAD 
GFNLTLEQVA ALRIPSIVLI DTGGYLHFVV IKGIRDGQVL VGDPAMGLRA YNAETFKQLR 
RGPLLVIRDR HDLAQLTFNP DRAWAVQTRP PFEHAREHQG LSDFTRNLRR PGDW