| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0728 |
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| Symbol | |
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| ID | 4711141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 813982 |
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| End bp | 814662 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855191 |
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| Product | ribonuclease T |
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| Protein accession | YP_001002312 |
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| Protein GI | 121997525 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC AGAACCCCGC GCAGTCGTCC GCCGCGGACG AGCGTATTCA GAGCACCGAG
ATCCCCCCCC TGCGCACCCG TTTTCGGGCC TTCCTGCCGG TGGTGGTGGA TGTGGAGACG
GGCGGGCTGC AGGCCGAGAC CGATGCCCTG CTGCAGATCG CGGCGGTGAT CCTGCGCGCC
GAGGAGGGCA CCGGCCGGCT CTATCCGGCG GAGACGCACA CCTGTCATGT CCAGCCTTTC
GAGGGGGCAC GCATCGACCC CAAGGCGCTG GAGCTCAACG GCATCGACCC CGAGCACCCA
CTGCGCATGG CGGTGCCCGA GCGCGACGCC CTGGGCAAGA TGTTCAACCC GGTCCGGCAG
GAGTTGCGTA ACACCGGCTG CAATCGGGCG GTGCTGGTCG GCCACAACGC CTTCTTCGAT
CTGGCCTTCC TCAACGCCGC GGTGACGCGG ACCGGCTTCA AGCGCAATCC CTTCCACCCC
TTCTCCAGTT TCGACACCGC CACCCTGGGC GGGCTGGCTT ACGGGCAGAC GGTGCTGGCC
AAGGCGGTGA AGGCCGCCGG CATCGAGTGG GACGCCAAGG AGGCCCACTC GGCGATCTAC
GACGCCGAGA AGACCGCCGA GCTCTTCTGC GCCATCGTCA ACTGCTGGGA CGCGCACTGC
GGCCGTCCGT CCAGCTTCTA G
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| Protein sequence | MTEQNPAQSS AADERIQSTE IPPLRTRFRA FLPVVVDVET GGLQAETDAL LQIAAVILRA
EEGTGRLYPA ETHTCHVQPF EGARIDPKAL ELNGIDPEHP LRMAVPERDA LGKMFNPVRQ
ELRNTGCNRA VLVGHNAFFD LAFLNAAVTR TGFKRNPFHP FSSFDTATLG GLAYGQTVLA
KAVKAAGIEW DAKEAHSAIY DAEKTAELFC AIVNCWDAHC GRPSSF
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