| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0721 |
|---|
| Symbol | |
|---|
| ID | 4711376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 807547 |
|---|
| End bp | 808491 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639855184 |
|---|
| Product | electron transport complex, RnfABCDGE type, D subunit |
|---|
| Protein accession | YP_001002305 |
|---|
| Protein GI | 121997518 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.270161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATGGG TCCTGCTCGC CCTCCTGCCG GGGGCGGGCG TGCTGGTGTG GCTCTTCGGC
GTCGGCGTGC TCCTGAACAT CACTGCCGCG CTGACCGCCG GCGTCGCCGC CGAGGCCGCG
GCGCTGCGCC TGCGCGGCCG CCCGGTGGCC CCGGCCCTGA CCGACGGCAG CACGCCCCTG
GCGGCCCTGA TCATCGGCAT CGCCCTGCCG CCCCTGCTGC CCTTCTGGAT CCCCGCCCTG
GCCGGCGCCC TGGCCGTGCT GCTGGGCAAG CAGGTCTACG GCGGGCTGGG GCAGAACATC
TTCAATCCGG CCATGGTCGG CTACCTGGCG GTGGTCCTCG CCTTCCCCCA GGCGGTGAGC
CTGTGGCCGG CCCCGGAGAC CGGCGTGGGG GCCGCGGTAC CCGCCACCGA GGCCCTGCAC
TACTTCCTCA CCGGCGCCCT GCCGCCCATT GCCGACGCCA TGACCCACGC CACGCCGCTG
GACCGGCTGG CCACCGAGGG CTTCGCCGCC CTGCCCGGCG ATGGCGGCCT GTGGGGGCAG
ACCCAGGCCG CCGGCGCCTG GCTGTGGCTC GGCGCCGCCT TGCTGCTCGG CGGCGCCGGC
CTGCTGGCCC TGCGCATCGT CGACTGGCGC CTGCCGGTCG GGGTGCTGGT CGGCACCGCC
GCCACCGCGG CGCTGCTGCA GCTCGGTGAC GGCGCCCCGG TCCTCTTTCA CCTGCTCTCC
GGGGCAACCC TGCTGGTGGC CTTCTTCATC GCCACGGACC CGGTCAGCGC CCCGCGGGAG
CCCACGGCGC GGCTGATCTA CGCCGCACTG ATCGGCGTGG TGGCGCTGGT CATCCGCGAA
CTCGGCGGCC ACCCGGACGG CTTCGCCTTC GCCGTGCTGA TGCTCAACGC CACCGCGCCG
CTGCTCGACT ACGTGGTACG CCGCAGCGCC GGGGAGGCCG CATGA
|
|---|
| Protein sequence | MGWVLLALLP GAGVLVWLFG VGVLLNITAA LTAGVAAEAA ALRLRGRPVA PALTDGSTPL
AALIIGIALP PLLPFWIPAL AGALAVLLGK QVYGGLGQNI FNPAMVGYLA VVLAFPQAVS
LWPAPETGVG AAVPATEALH YFLTGALPPI ADAMTHATPL DRLATEGFAA LPGDGGLWGQ
TQAAGAWLWL GAALLLGGAG LLALRIVDWR LPVGVLVGTA ATAALLQLGD GAPVLFHLLS
GATLLVAFFI ATDPVSAPRE PTARLIYAAL IGVVALVIRE LGGHPDGFAF AVLMLNATAP
LLDYVVRRSA GEAA
|
|---|
| |