Gene Hhal_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0709 
Symbol 
ID4711046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp792114 
End bp793280 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content72% 
IMG OID639855172 
Producthypothetical protein 
Protein accessionYP_001002293 
Protein GI121997506 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGGCG GGTTGTCTGA TGACGACCGA CACCCACCGA CAGCAACCGA TACCCCGCCC 
ATGCGCACGG CCGTACCCCT TGCCCCTTCC TTCGCCTCTC GCCGTCCAGC CGGTGTCGTG
CTGGCCGCCG TCCTCGCCGC GTGGACCCTG CTCGCTGCGG GCACGGCGGC GGCGAGCGAT
CTCTTCACCG CCGAGATCCC CGTGGAAGGC CGGCAGGACG CCGAGCGCGA GGCGGCCGTG
GAGGCGGGTC TGGAACAGGT CATCGGGCGC ATGGTGGGGG TGTACCAGGG TCTGGGGGAT
CACCCGGCGG CGGAGTTGCT CGAGGACGCC GGGCGCTACC TGGCGAGCTA CCGGTACGTG
CGGGTGGACG ACGAGCTGGC CGTGGAGCTG CGCTTCGAGG GCGATGTGCT GCGCCGCCAA
CTGGGCGAGC GGGAGGTGGC GGTCTGGGGT GAGCACCGGG CGCCGATCCT GCTCTGGGTG
GCGACCGAGA TCGACGGCCG GCGGGATCTG CTCGGTTTTG CCGCGTCCGG GACCGAGGGC
GAGGTGCTCG AAGCACTCCA TCAGGGGGCC GAGCAGCGGG CCCTGCCGCT GATGTACCCG
ACGCTGGATC TTCGCGACCG GCGGGCGGTG GGGTTCGTGG ATATCTGGGG CGGTTTTGAT
GAGTCCCTGC GCGAGGCCTC GCAGCGCTAC GGCAGCACCG CCGTGGCGGC GGTGGGTCTG
CGGCAGACCG GTACCGGCGC CTGGCGGGCG CGCTGGACGG TGCTCACCGG CGACGACACC
CTGCAGCACC ACACCGGCCC GGGCGATCTG GAGCGGGTGG TCCGCGAGGG GCTCGACGAG
GTCGGGGGCG CCCTGACCCG GCGCTTCGCC GTGGTCCCCG GTGAGCACGA CGGTCAGCAG
CTGGAGATCG CCATCACCGG GATCGAGGGC GTCGAGGACT ACCTCGGGGC GGTACGCTAT
CTGGAAGACG TCACCGGGGT CGAGCAGGTG GACGTCCAGC GCATCGCCGG CGATCGGGTC
ACCCTGCGGC TGATGCTCGA GCGCGCCCCC GAGCGGGTGG CGGCCGATTT GGACGATGCC
GACACGCTCT GGCCCGAGGC CCTGCCCGCC ACCGAGATGG GGCCCGGTGG CGGGCAGCTC
ACGCGCAGCT ACCGCTGGCA GCGGTAA
 
Protein sequence
MLGGLSDDDR HPPTATDTPP MRTAVPLAPS FASRRPAGVV LAAVLAAWTL LAAGTAAASD 
LFTAEIPVEG RQDAEREAAV EAGLEQVIGR MVGVYQGLGD HPAAELLEDA GRYLASYRYV
RVDDELAVEL RFEGDVLRRQ LGEREVAVWG EHRAPILLWV ATEIDGRRDL LGFAASGTEG
EVLEALHQGA EQRALPLMYP TLDLRDRRAV GFVDIWGGFD ESLREASQRY GSTAVAAVGL
RQTGTGAWRA RWTVLTGDDT LQHHTGPGDL ERVVREGLDE VGGALTRRFA VVPGEHDGQQ
LEIAITGIEG VEDYLGAVRY LEDVTGVEQV DVQRIAGDRV TLRLMLERAP ERVAADLDDA
DTLWPEALPA TEMGPGGGQL TRSYRWQR