Gene Hhal_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0704 
Symbol 
ID4710821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp788121 
End bp789476 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content70% 
IMG OID639855167 
Productputative ribonuclease BN 
Protein accessionYP_001002288 
Protein GI121997501 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.71296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTATC AACTACGGAG GCGCGGAACC AAGATGACGG AACTGCGCGG CCGCCTGCGT 
GCCGCCGGCG ACAGGCTTCG GGCGCTGCCC ACCCACCCGG GGGTCGGCGA GGCGCGGGGC
TTCGGTGAGT ATCTGATCCA GCGCATCCAG CAGGACCAGT GCGCCAAGAG CGCCGGCATG
CTCGCCTACG TCACCCTGCT GGCGATCGTC CCGCTGATGA CCATCGGCTT CTCGGTACTC
GCCGCCTTCC CGGTCTTCGA GGGCGTCACC GATCGCCTGC GCGAGGCCAT GGTCGACTAC
CTGGTCCCGG CGGCCAGCGA CGCCATCGAC GAGCACCTGG AGAACTTCAT GGGCCGCGCC
GCTGAGCTCA CCGCGGTGGG CATCGCCGGT CTGACGGTCA CCGCACTGCT GCTGCTCAAC
ACCATCGAGC GGGTGCTCAA CGAGATCTGG CGGGTGGAGC GGCCGCGGCC GACCCTGCAG
CGGTTCATGG TGTACTGGAC GGTGCTGACC ATGGGGCCGC TGCTGCTCGG CGTGAGCGTG
GCCTCCACCT CGTACATGGG CACGGTGAAT CTGGGCCCGC TGGAGCCGCC GTCGGACCTG
ATCGCGCAGC TGCTCAATCT GGCGCCCTTC GTGGTGCAGG CGATTGTCTT CTCGCTGATC
TACAGTCTTG TCCCGCACCG CAGTGTGCCG GTGCTCCACG CCGTCATCGG CGGAGTGGTG
GCCTCGGGGC TGTTCGAGCT GGCCAAGGGT GGTTTTGCCG CGTTCATCGC CCGCGCCCCC
ACCTACGAGG TCGTCTACGG GGCCCTGGCG GCGCTGCCGA TCTTCCTGGT CTGGCTGTAC
ATCTCCTGGC TGGTGATCCT CATCGGCGCC GAGGTCACCC AGGCCCTGCG CGGCTACCGC
TGGCGCACCG GCGGCGATCT GGCCCGCAAC CGCTGGGCAC TGGTGCTGGC GGTGCATATC
CTGGGGCACC TCTACCAGGC GCAGCGCCGC GGCGCCGGGG TGACCTTCGC CGAGCTGCTC
GAGCAGGAGC CGGACGCCGG AGAGCCCGCC CTGGCCGAGG CCCTGGAGAC CCTGCGCCGG
CACCACGTCA TCGAGCGCAG CGCGGACGGG GCGTGGCTGC TGGCGCGGGA TACCTCGACC
TTCACCCTGG CCGAGCTGCA CCGCATGCTC GCCTACCCGC TGCCGCCGGC GGCGGGGCTG
GAGACCGGGG CACCCTGGGA CCGTCGGCTG GCCGAGCGGC TGCGCCGGGT GGAGGAGCGT
TGGGAGCAGA GCTTCGATCT GTCGCTGAGC GACCTGCTCG AGCCGACCGC CGAGGAGGCT
GGAGCAGGGC GTTCGGCCCG TGCGGAGGTG GCATGA
 
Protein sequence
MHYQLRRRGT KMTELRGRLR AAGDRLRALP THPGVGEARG FGEYLIQRIQ QDQCAKSAGM 
LAYVTLLAIV PLMTIGFSVL AAFPVFEGVT DRLREAMVDY LVPAASDAID EHLENFMGRA
AELTAVGIAG LTVTALLLLN TIERVLNEIW RVERPRPTLQ RFMVYWTVLT MGPLLLGVSV
ASTSYMGTVN LGPLEPPSDL IAQLLNLAPF VVQAIVFSLI YSLVPHRSVP VLHAVIGGVV
ASGLFELAKG GFAAFIARAP TYEVVYGALA ALPIFLVWLY ISWLVILIGA EVTQALRGYR
WRTGGDLARN RWALVLAVHI LGHLYQAQRR GAGVTFAELL EQEPDAGEPA LAEALETLRR
HHVIERSADG AWLLARDTST FTLAELHRML AYPLPPAAGL ETGAPWDRRL AERLRRVEER
WEQSFDLSLS DLLEPTAEEA GAGRSARAEV A