Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0704 |
Symbol | |
ID | 4710821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 788121 |
End bp | 789476 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639855167 |
Product | putative ribonuclease BN |
Protein accession | YP_001002288 |
Protein GI | 121997501 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.71296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACTATC AACTACGGAG GCGCGGAACC AAGATGACGG AACTGCGCGG CCGCCTGCGT GCCGCCGGCG ACAGGCTTCG GGCGCTGCCC ACCCACCCGG GGGTCGGCGA GGCGCGGGGC TTCGGTGAGT ATCTGATCCA GCGCATCCAG CAGGACCAGT GCGCCAAGAG CGCCGGCATG CTCGCCTACG TCACCCTGCT GGCGATCGTC CCGCTGATGA CCATCGGCTT CTCGGTACTC GCCGCCTTCC CGGTCTTCGA GGGCGTCACC GATCGCCTGC GCGAGGCCAT GGTCGACTAC CTGGTCCCGG CGGCCAGCGA CGCCATCGAC GAGCACCTGG AGAACTTCAT GGGCCGCGCC GCTGAGCTCA CCGCGGTGGG CATCGCCGGT CTGACGGTCA CCGCACTGCT GCTGCTCAAC ACCATCGAGC GGGTGCTCAA CGAGATCTGG CGGGTGGAGC GGCCGCGGCC GACCCTGCAG CGGTTCATGG TGTACTGGAC GGTGCTGACC ATGGGGCCGC TGCTGCTCGG CGTGAGCGTG GCCTCCACCT CGTACATGGG CACGGTGAAT CTGGGCCCGC TGGAGCCGCC GTCGGACCTG ATCGCGCAGC TGCTCAATCT GGCGCCCTTC GTGGTGCAGG CGATTGTCTT CTCGCTGATC TACAGTCTTG TCCCGCACCG CAGTGTGCCG GTGCTCCACG CCGTCATCGG CGGAGTGGTG GCCTCGGGGC TGTTCGAGCT GGCCAAGGGT GGTTTTGCCG CGTTCATCGC CCGCGCCCCC ACCTACGAGG TCGTCTACGG GGCCCTGGCG GCGCTGCCGA TCTTCCTGGT CTGGCTGTAC ATCTCCTGGC TGGTGATCCT CATCGGCGCC GAGGTCACCC AGGCCCTGCG CGGCTACCGC TGGCGCACCG GCGGCGATCT GGCCCGCAAC CGCTGGGCAC TGGTGCTGGC GGTGCATATC CTGGGGCACC TCTACCAGGC GCAGCGCCGC GGCGCCGGGG TGACCTTCGC CGAGCTGCTC GAGCAGGAGC CGGACGCCGG AGAGCCCGCC CTGGCCGAGG CCCTGGAGAC CCTGCGCCGG CACCACGTCA TCGAGCGCAG CGCGGACGGG GCGTGGCTGC TGGCGCGGGA TACCTCGACC TTCACCCTGG CCGAGCTGCA CCGCATGCTC GCCTACCCGC TGCCGCCGGC GGCGGGGCTG GAGACCGGGG CACCCTGGGA CCGTCGGCTG GCCGAGCGGC TGCGCCGGGT GGAGGAGCGT TGGGAGCAGA GCTTCGATCT GTCGCTGAGC GACCTGCTCG AGCCGACCGC CGAGGAGGCT GGAGCAGGGC GTTCGGCCCG TGCGGAGGTG GCATGA
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Protein sequence | MHYQLRRRGT KMTELRGRLR AAGDRLRALP THPGVGEARG FGEYLIQRIQ QDQCAKSAGM LAYVTLLAIV PLMTIGFSVL AAFPVFEGVT DRLREAMVDY LVPAASDAID EHLENFMGRA AELTAVGIAG LTVTALLLLN TIERVLNEIW RVERPRPTLQ RFMVYWTVLT MGPLLLGVSV ASTSYMGTVN LGPLEPPSDL IAQLLNLAPF VVQAIVFSLI YSLVPHRSVP VLHAVIGGVV ASGLFELAKG GFAAFIARAP TYEVVYGALA ALPIFLVWLY ISWLVILIGA EVTQALRGYR WRTGGDLARN RWALVLAVHI LGHLYQAQRR GAGVTFAELL EQEPDAGEPA LAEALETLRR HHVIERSADG AWLLARDTST FTLAELHRML AYPLPPAAGL ETGAPWDRRL AERLRRVEER WEQSFDLSLS DLLEPTAEEA GAGRSARAEV A
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