Gene Hhal_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0676 
Symbol 
ID4710247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp758837 
End bp759379 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content74% 
IMG OID639855138 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_001002260 
Protein GI121997473 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.546639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGG CGATCACCGC CTATGTGGGA CTCGGCAGCA ACCTCGATCA GCCGCGGCGG 
CAGATCGAGC GGGCCGTGGT GCGCCTGGAT CTGCTCCCCG GTTGCCGGGT GCGGGCCGTC 
TCCAGCCTCT ACCGCAACCC GGCCCTGCAG GCGCCGGGCG TGCCGCCGCA GCCGGATTTC 
ATCAACGCGG TGGCGGCGGT GGAGACCCGG CAGGGGCCGT TGGCCCTGCT CGACGCCCTG 
CTCGGCATCG AGGCCGAACA CCAGCGCCGG CGCGACGGCG TGCGCTGGGG GCCGCGGACC 
CTGGATCTGG ACCTGCTGCT CTACGGCCAG ATGCAGGTCG AGGAGCCGCG CCTGCAGGTC 
CCGCACCCGG AGCTGAGCCA GCGGCCGTTC GTCGTCCATC CGCTGCTGGA GATCGCCCCG 
GGGGTGCGCC TGCCCGGGGC CGGGGCCCTG GCCGATGCCG CCGCGGCGGT GGCCGCTGAT 
ACCCTCGAAC GGATCGGGGC GGTGGCCGGT TTTGAGCACG TGTCGGTGCA GGAGCTGGCC 
TGA
 
Protein sequence
MSTAITAYVG LGSNLDQPRR QIERAVVRLD LLPGCRVRAV SSLYRNPALQ APGVPPQPDF 
INAVAAVETR QGPLALLDAL LGIEAEHQRR RDGVRWGPRT LDLDLLLYGQ MQVEEPRLQV 
PHPELSQRPF VVHPLLEIAP GVRLPGAGAL ADAAAAVAAD TLERIGAVAG FEHVSVQELA