| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0666 |
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| Symbol | |
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| ID | 4710052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 748883 |
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| End bp | 749155 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639855128 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001002250 |
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| Protein GI | 121997463 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0371951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAAGG GGCAGTCACT GCAGGAACCC TTTCTCAATA CGTTGCGCAA AGAGAAGGTC
CCGGTCTCGA TCTACCTGGT CAACGGCATC AAGCTCCAGG GACAGATCGA ATCCTTCGAC
CAGTTCGTGG TGCTGCTGCG CAACAACGTG AACCAGATGG TGTACAAGCA CGCCATCTCG
ACCATCGTCC CGGCACGGCG CGTGCGCCTG CCGCAGCAGG GCGAAGAGGC ATCCGCCGAA
TCGATTGTCG GCGAGGAGGA GAGCAATAAC TGA
|
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| Protein sequence | MAKGQSLQEP FLNTLRKEKV PVSIYLVNGI KLQGQIESFD QFVVLLRNNV NQMVYKHAIS
TIVPARRVRL PQQGEEASAE SIVGEEESNN
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