Gene Hhal_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0625 
Symbol 
ID4709622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp701616 
End bp702749 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content69% 
IMG OID639855089 
ProductCRISPR-associated NE0113 family protein 
Protein accessionYP_001002212 
Protein GI121997425 
COG category 
COG ID 
TIGRFAM ID[TIGR02584] CRISPR-associated protein, NE0113 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG ACACCGACGC GCCTCATACC CTCCTCTGCG TCACCGGGCT GACGCCACAG 
GTGGTCACCG AGACGCTCTA CGCCCTCGCG CAGGAGGGGG CACACGCCCT TCCGGATCGC
ATCGAGGTCA TCACCACGAC CGAGGGCCGG CGCCGCCTGG CGTTGACCCT GCTCGCCGAG
CACGGCGGCC ACGGCTACCT GGACCGACTT TGCGCCGACT ACGGTATCGA CCGCGGCGCC
CTCGCCTTCG ACGTGGACAG TATCCACGTT GTCGGCGGCG CCGACGACGA GCCCCTCGCC
GATATCGTCA CTGAGGCGGA CAACGCCGCG GCCGCCGACC GGATCCACGA GCGCATCCGC
ACCCTGACCG AGCAGCCCGG GCGGCTGCAC GTCTCCCTCG CCGGGGGACG CAAGACCATG
GGCTTCTACG CCGGTTACTC GCTCTCGCTC TACGGCCGGG GGCACGACCG GCTCAGCCAC
GTGCTGGTCA ATCCGCCCTT CGAGTCGCAC CCGGACTTCT TCTACCCACC ACCGACGCCG
GCAACCCTCC AGCTACCCGG GCGCAACGAC ATCATCAGCA CCGCCGAGGC CGAGGTGCGT
CTCGCCGAAC TGCCTTTCGT CCGGCTGCGC GAGGAGCTCG GCGAGGAGCT GCCGCATCAG
GGGCTATCCT TCAGCGAGGC GGTCGAGCGC GCCCAGCAGG TACTGATCCC GCCCCAATTG
ACCATCGATC TTACTGAGCG CACCGTCACG CTCCAGGGGC AGCCGATCAC CCTCTCGGCA
ACCCACTTCC TCTGGCTGAC CTGGCTGGCC GACCGCGCTC GGCAAGAGGC CCCAGCGATC
GCCTTCGACG AGGCCGCGGT TGATGAACTG ACGGGCTACG CCGACTGGCT TGAAGGTCGC
CTCTCACAGC TGCATGAGAG CCTGGCCTCG GCGCGCAAGG AGATCGAGCG AGAAGGCCGC
TCGAACTACT TCGAGCGCAC CCGCTCGCGA CTCAACAAGG CCATCGCCGA GCGCAGCGGC
CTGCCCACCC GGGCGGCAGC GCGCTACCAG ATCCACACCC ACAGCAGCCG GCCCCAGACC
ACCTACGGCC TGAAGCTCGA GCCGGAGCAG ATTCGTATCG AGGGGGAGCC GTGA
 
Protein sequence
MTADTDAPHT LLCVTGLTPQ VVTETLYALA QEGAHALPDR IEVITTTEGR RRLALTLLAE 
HGGHGYLDRL CADYGIDRGA LAFDVDSIHV VGGADDEPLA DIVTEADNAA AADRIHERIR
TLTEQPGRLH VSLAGGRKTM GFYAGYSLSL YGRGHDRLSH VLVNPPFESH PDFFYPPPTP
ATLQLPGRND IISTAEAEVR LAELPFVRLR EELGEELPHQ GLSFSEAVER AQQVLIPPQL
TIDLTERTVT LQGQPITLSA THFLWLTWLA DRARQEAPAI AFDEAAVDEL TGYADWLEGR
LSQLHESLAS ARKEIEREGR SNYFERTRSR LNKAIAERSG LPTRAAARYQ IHTHSSRPQT
TYGLKLEPEQ IRIEGEP