| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0612 |
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| Symbol | |
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| ID | 4709349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 691597 |
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| End bp | 693015 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855076 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001002199 |
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| Protein GI | 121997412 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.352245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACCC CGAGGTCGTC CATGCGCAAA ATCCGTGAGG TGCTTCGCCT TCGCTACGAG
CTGGGCCTGA GCCAGCCCCG CATCGCCTCC GCCTGCCAGC TGGGGGTGAA CACCGTGTAC
CGATACCTTC GGCGCGCCCG GGCCGCCGGC CTCGGGTGGC CGCTGCCCGA GGAGCTGGAT
GATCATGCCC TGGAGCGGCT GCTCTTTCCG CATCGCTCGG GCGCTCGGAC TGACCTCCCG
CCGGAACCGG ACTGGGAGCA GGTTGCCCGC GAGCTCACTC GCAAGGGTGT CACCCGGCAC
CAGCTCTGGC TCGAGTACCG CGAGCAGGAG CCGAAGGGGT ACGGCTACTC GGCGTTTTGC
GTGCACCTGC GCCGTCATGT GGGCCGAGAG CAGCCGAGCA TGGCGCAGCT CCATACCGCC
GGCGAGGCGC TCTATGTCGA TTACGCCGGC ATGACCGTCC CGATCCAGGA TGGCGAGACC
GGGGAGCAGG CGCCGGCGCA GGTCTTTGTC GCGGTGCTCG GCTGCTCGCA GCTGATCTAC
ACCGAGGCCG CGGCGAGCCA GTGCAGCAGC GACTGGCTCA ACGCCCACAT CCGGGCGCTG
ACCTACATCG GTGGCGTACC CGAGTGCATC GTCCCTGATA ACCTCAAAAG CGCCGTACAG
CGCCCCCATC GCTACGACCC ACAGCTCAAC CGGGCCTACG CTGAGCTGGC CGAGGTCTAC
GGGTTTGCCG TCGTGCCGGC CCGGGTGCGT GCCCCCAAAG ATAAGGCGCT GGCCGAGAAC
GCCGTGCTGA TTGTCGAGCG AGAGATCCTT GCGCCGATGC GCGATCGGCG CTTCTTCAGC
CTGGCGGAGG CGAATGCGGC GATCCGCGAG CGGCTCGATG CGCTGAATGA GCGGCCGTTC
TCGCGCCGTG CTGGCAGTCG GCGGCAGCGT TTTGAGGAAC TCGAGCGCGC GGCACTGCGG
CCATTGCCGA CGCACCCCTT TGAGCCGGCC CTGTGGCGCC GTTTGCAGCT CGGGTCGACC
TATCATGTCG AGCACGCCGG GCATAGCTAC AGCGTCCCGC ACGGGCTCAT CGGCCAGGAG
GTGGAGCTGC GGATCACCGC CGCCGCGCTC GAGATCTTCC ACGCCAGCCA GCGCGTTGCC
GCCCATCCGC GTCACGACGG CCCGGGGGGG GCAAAGCACC CTGAGCGAGC ACATGCCGCC
GCACCACCGG GCTTACGCGG CGCTCGACGG CGGGCAGATG CTGCGCTGGG CCGAGGGCGT
CGGCGTGGCG ACCGCCACGC TACTGCGCCA GGAGCTCGAA AACGGCCCGC TACGCCGCGC
AAGGCGTCTG GCCGAAGGAC TCCAGCGCCT GGCTCGTCAT TACGGCCCAC AGCGCCTGGA
AGCGGCCTCG GAGCGGGCAT TGAGCCTGGG GGTAGGTAG
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| Protein sequence | MPTPRSSMRK IREVLRLRYE LGLSQPRIAS ACQLGVNTVY RYLRRARAAG LGWPLPEELD
DHALERLLFP HRSGARTDLP PEPDWEQVAR ELTRKGVTRH QLWLEYREQE PKGYGYSAFC
VHLRRHVGRE QPSMAQLHTA GEALYVDYAG MTVPIQDGET GEQAPAQVFV AVLGCSQLIY
TEAAASQCSS DWLNAHIRAL TYIGGVPECI VPDNLKSAVQ RPHRYDPQLN RAYAELAEVY
GFAVVPARVR APKDKALAEN AVLIVEREIL APMRDRRFFS LAEANAAIRE RLDALNERPF
SRRAGSRRQR FEELERAALR PLPTHPFEPA LWRRLQLGST YHVEHAGHSY SVPHGLIGQE
VELRITAAAL EIFHASQRVA AHPRHDGPGG AKHPERAHAA APPGLRGARR RADAALGRGR
RRGDRHATAP GARKRPATPR KASGRRTPAP GSSLRPTAPG SGLGAGIEPG GR
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