| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0604 |
|---|
| Symbol | tig |
|---|
| ID | 4711551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 683151 |
|---|
| End bp | 684461 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639855064 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001002192 |
|---|
| Protein GI | 121997405 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTT CCGTGGAGAC GACCGAAGGC CTGGGCCGCC GCATGACGGT CCAGGTCCCC
GCCGAGCGCG TGGAGAACGA GGTAGAACGC CGGCTGAAGG ACCTCAGTGG CCGCGTTAAG
ATGGACGGCT TCCGCCCTGG CAAGGTGCCG GTCAAGGTCG TTCGCAAGCA GTACGGCGCA
CAGGTGCGTA GCGAGGTGCT CAGCGAGGTG GTCCAGCAGA CCTACTCCGA GGCCCTGGAG
CAGGAGTCCC TGCGCCCGGC CGGTAACCCG CATATCGAGC CCAAGCGCAC CGGCGAAGGG
GAAGACCTGG AGTACGAGGC CTCCTTCGAT GTGCTGCCCG AGATTGAGGT CGCGGGGCTG
GACCAGATCC AGGTCGAGCG GCCCCAGGTC GAGATCACCG ACGCCGACCT GGACAACGTC
CTCGAGCGCC TGCGCAAGCA GCACGCCGAT TACCAGGAGG TGGATCGGGC GGCCCAGGAC
GAGGACCGCG TGGTGATCGA CTTCCACGGC ACCATCGACG GCGAGGCGTT CACCGGCAAC
TCCGCCGAGG ATGCGCCGCT GATCCTCGGT GCCGGGCAGT TGCCCGAGGC CTTCGAGCAG
GGGCTGCAGG GGGCGAAGGC CGGCCAGGAG CTGACGGTCG AGCACAAGTT CCCGGACGAG
CTCGCCGAGC CGAGCATCGC CGGCAAGACC GCCGTCTTCC AGGTGACGGT CAAGCGAGTG
GAAGAGCCGC AGCTGCCGGA GCTGGATGAC GACTTTGCGG CTCGCCTGGG TATCCAGGAA
GGGGGCGTCG AGGCGCTGCG CGAGGCCGTG CGTGGCAACC TCGAGCGCGA GCGGCATCAG
GCCGTGCGTC AGCGTCTCAA GCGACAGGTG CTCGATCAGC TGGCCGATCA GAATGAGCTG
GAGCTGCCCA AGAGCCTGAT CGACGGCGAG ATCCAGGCCC TGCGGCAACA GTCGGGCGCC
AGCGCCGAGG GCGAGCTGCC CGAGTCGGAG CGCTCGGCTT ATGAAGACGT GGCGAGTCGC
CGGGTCAAGC TGGGGCTGCT GGTCAACGAG CTGGTGCGCA GCCAGGGCAT CCAGCTCGAT
CGCGAGCGCA TGATGACCCA GCTGCGTGAG ATGGCTGCCA ACTCCGGCCA GGATCCGAGC
GAAGCGCTGC AGCAGATTGC CCAGGACCGG CAGATGATGC AGAGCCTGGA GGCCTCGGTC
ATCGAGGAGC AGGTGGTCGA CTGGCTGCTC GAGCAGGTGC AGACCGAAGA CAAGACGCTG
AGCTTCGACG AGCTCATGAA CAGCGAGGAC GGCGACCAGG CTTCGGCCTG A
|
|---|
| Protein sequence | MQVSVETTEG LGRRMTVQVP AERVENEVER RLKDLSGRVK MDGFRPGKVP VKVVRKQYGA
QVRSEVLSEV VQQTYSEALE QESLRPAGNP HIEPKRTGEG EDLEYEASFD VLPEIEVAGL
DQIQVERPQV EITDADLDNV LERLRKQHAD YQEVDRAAQD EDRVVIDFHG TIDGEAFTGN
SAEDAPLILG AGQLPEAFEQ GLQGAKAGQE LTVEHKFPDE LAEPSIAGKT AVFQVTVKRV
EEPQLPELDD DFAARLGIQE GGVEALREAV RGNLERERHQ AVRQRLKRQV LDQLADQNEL
ELPKSLIDGE IQALRQQSGA SAEGELPESE RSAYEDVASR RVKLGLLVNE LVRSQGIQLD
RERMMTQLRE MAANSGQDPS EALQQIAQDR QMMQSLEASV IEEQVVDWLL EQVQTEDKTL
SFDELMNSED GDQASA
|
|---|
| |