Gene Hhal_0602 details

Gene Information

• Locus tag: Hhal_0602
• Symbol: clpX
• ID: 4709296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 681128
• End bp: 682408
• Gene Length: 1281 bp
• Protein Length: 426 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639855062
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_001002190
• Protein GI: 121997403
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATC GAACTCAGAA CAAGGGCGAT GACAGCGGCA AGCTGCTGTA CTGCTCCTTC 
TGCGGGAAGA GCCAGCACGA GGTCCGCAAG CTCATCGCCG GGCCATCGGT GTTCATCTGT 
GACGAGTGCG TCGAGCTCTG CAACGACATC ATCCGCGAGG AGCTCCAGGA AGGTGCGGCG 
ACGGAAGGCG GCGGGCTGCC CCGGCCCCAC GAGATCAACC GCGAGCTCGA CCAGTACGTC 
ATTGGCCAGG AGCACGCCAA GAAGGTGCTC TCGGTGGCGG TGTACAACCA CTACAAGCGC 
CTCGAGAGCC GGACCAGCCA GGACGATGTG GAGCTGACCA AGAGCAACAT CCTGCTCATC 
GGCCCCACCG GCTCGGGCAA GACGTTGCTC GCCGAGACCC TGGCGCGGCT GCTCAACGTG 
CCGTTCACCA TCGCCGACGC CACGACTCTG ACCGAGGCCG GGTATGTCGG TGAGGATGTC 
GAGAACATCA TCCAGAAGTT GCTGCAGAAG TGCGATTACG ACGTCGAGAA GGCGCAGCAC 
GGCATCGTCT ACATCGACGA GATCGACAAG GTCTCGCGCA AGGCGGACAA CCCGTCGATC 
ACCCGGGACG TCTCCGGCGA GGGGGTGCAG CAGGCGCTGC TCAAGCTGAT CGAGGGGACC 
ACGGCCTCGG TGCCCCCGCA GGGTGGGCGC AAGCACCCTC AGCAGGAGTT CGTGCAGGTC 
GATACCAGCA ACATGTTGTT CATCTGCGGC GGCGCTTTCG CCGGGCTCGA CAAGGTCATC 
CAGGAGCGCT CCGAGCGGGG CGGGATCGGC TTCTCGGCCG AGATCAAGGG CGAGGGCGAG 
CGAGCTAGCG TCGGCGAGAC GCTGCAGACC GTTGAACCCA GCGATCTGGT CCGCTACGGC 
CTGATCCCGG AGTTTGTCGG CCGGCTGCCG GTCATCGCGA CCCTCAACGA GCTCGATCAG 
GAGGCCCTGG TGCAGATCCT CCGCGAGCCG AAGAACGCGC TGGTTAAGCA GTACCAGAAG 
CTCTTTGAGA TGGAGGGTGT GGAGCTCGAC CTGCGCGATG ACGCCCTGCG GGCGGTGGCC 
GACAAGGCGA TGGAGCGCAA GACCGGTGCC CGCGGGCTGC GCACCATCAT CGAGCAGGTG 
CTGCTCGAGA CCATGTACGA GCTCCCGTCC ATGGAGAATG TCAGCAAAGT GGTGGTCGAC 
GAGTCGGTCA TCGCCGGCGA CAGCGACCCG TACATCGTCT ACGCGGGCCC CGAGCATTCC 
AAGGCGGCGT CCGACGAGTA G 

 

Protein sequence

MTDRTQNKGD DSGKLLYCSF CGKSQHEVRK LIAGPSVFIC DECVELCNDI IREELQEGAA 
TEGGGLPRPH EINRELDQYV IGQEHAKKVL SVAVYNHYKR LESRTSQDDV ELTKSNILLI 
GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQH 
GIVYIDEIDK VSRKADNPSI TRDVSGEGVQ QALLKLIEGT TASVPPQGGR KHPQQEFVQV 
DTSNMLFICG GAFAGLDKVI QERSERGGIG FSAEIKGEGE RASVGETLQT VEPSDLVRYG 
LIPEFVGRLP VIATLNELDQ EALVQILREP KNALVKQYQK LFEMEGVELD LRDDALRAVA 
DKAMERKTGA RGLRTIIEQV LLETMYELPS MENVSKVVVD ESVIAGDSDP YIVYAGPEHS 
KAASDE