| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0597 |
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| Symbol | |
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| ID | 4710860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 672913 |
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| End bp | 674814 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855055 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001002185 |
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| Protein GI | 121997398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGCA TGCTCCCATT CCCCCGCAGG CGCTGCGCTC CCCGGCATTC TCCGCCCTGT
TGGGCGGCCG TGATGGCGGC GGTGTTCCTG ACGGTTCTGC TCCCGCTCTC CGCCGCGACC
GGCAACGAGG AGGACGCCCC GGGCGTCCAC GGCCTGGCGT TGCACGGCGA GCCCAAATAC
CCGCCGGACT TCTCCCACTT CGACTACGTC AACCCGAAGG CCCCCAAGGG GGGTACGGTC
ATCCGCGAGG CGCGGGGGAG TTACGATAGC CTCAACGGCT ACATCCTGCG CGGGACCAAA
CCGCCGGGTC TGGGGATGGT GATCGATACC CTGATGGTCC ACGCCGATGA TGAACCGTTT
TCTGTCTACG GGCTGATCGC CGAACGCGTG GAGGTGGCCG AGGACAACGC CTGGGTCGAG
TTCAAGCTGC GTGAGGAGGC CCGTTTCCAC GACGGTGAAC CGATCACCGC CGATGACGTG
GTCTTCAGTT TCGAAGTGCT CCGTGAGCAC GGGCACCCCA GGTTGCGCTC CTACTACCGC
CACGTCGAGT CCGCCGAGGC CGAGGGTCGT CATCGGGTGC GTTTCGAGTT CGCCCACGCC
GGCAATCCCG AATTGCCGCT GATCATGGGC GAGCTGCCGG TGCTGCCTCA GCATTACTGG
GAGGAACGCG ATTTCAGCCG GACCACCATG CAGCCGCCGT TGGGCAGTGG GCCCTACCGG
ATCGCCGAGG CCCGTCCCGG GCGCAGCATC ACCTACGAGC GGGTGGAGGA CTACTGGGCG
GAAGACCTGC CCGTGCGTCG CGGGCGGTTC AATTTCGACC GCCTGCGCTA CGACTTTTAC
CGAGACGCCA CCGTTGCGCT GGAGGCCTTC CGCGCCGGGG AGTTCGATCT GCGCGAGGAG
TATACTGCCC GCCACTGGGC CACCGGTTAC GAGACCTCGG CGCAGCGCGA AGGACGCATG
GTTCTCGAGG AGATCGAGCA CAGCCGCCCG GCGGGGATGC AGGGGTTCGT CTTCAACACC
CGTCGCCCGG TCTTCGAGGA CCGCGAGGTG CGTCGGGCAC TGAGCTACGC CTTCGACTTC
GAGTGGACCA ACCGCCAGCT GTTCCACTCG GCGTATACGC GTACGGCGAG CTACTTCGAA
AACTCGGAGT TGGCAGCTCG CGGTGCACCG GGCGAGGCCG AGCAGGCGAT CCTCGCCCCC
TTCCGGGAGG AGCTCCCCGA GGCGGTCTTC GAGCCGTACC GGCCGCCGGT CACCGACGGC
TCGGGCTGGA ACCGCGAGAA TCTGCTCAAG GCGCTCCGCA TCCTCAAGGA GGCCGGCTGG
TCGGTGGGGG ACGACGGCAT CCTGCGTCAC CGGGACAGCG GTCGGCCGCT GGTCTTCGAG
CTGCTCCTGG TCAACCCGAG CTTCGAGCGC GTGGCCCTGC CGTTCGTCCA GAACCTTCGG
CGCATCGGAG TCCTGGCGCG GGTGCGCACG GTGGATACCA CCCAGTACCA GTACCGGCTG
GATCACTTCG AGTTCGATAT GGCTGTGGTG GTGCTGCCGC AATCGCCCTC GCCGGGTCAC
GAGCAGGCCA TGTACTGGAG TTCCGAGGCC GCTGACGAAC CGGGCAGCCG GAACTACGCC
GGGGTGCGGG ACCCGGTGGT CGACGAACTG GTCGAACGCC TGGTCTCCGC TGAGGATCGC
GATGAGCTGG TCCACCTGAC CCGCGCCCTG GACCGCGTCC TACTCGCCGG CCACTACGTG
ATCCCCAACT GGCATACCCC GGTCCATCGG GTCGCCTACT GGGACAAGTT CGGGCGGCCG
GAGACGGCCC CGAAGTACGG ACTGGGGTTC GATACCTGGT GGGTCGACCC GGACAAGGAG
CAACGGCTGC GCGAGGCCAA CGGCCCGCGG TCGGTCCGAT AG
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| Protein sequence | MSSMLPFPRR RCAPRHSPPC WAAVMAAVFL TVLLPLSAAT GNEEDAPGVH GLALHGEPKY
PPDFSHFDYV NPKAPKGGTV IREARGSYDS LNGYILRGTK PPGLGMVIDT LMVHADDEPF
SVYGLIAERV EVAEDNAWVE FKLREEARFH DGEPITADDV VFSFEVLREH GHPRLRSYYR
HVESAEAEGR HRVRFEFAHA GNPELPLIMG ELPVLPQHYW EERDFSRTTM QPPLGSGPYR
IAEARPGRSI TYERVEDYWA EDLPVRRGRF NFDRLRYDFY RDATVALEAF RAGEFDLREE
YTARHWATGY ETSAQREGRM VLEEIEHSRP AGMQGFVFNT RRPVFEDREV RRALSYAFDF
EWTNRQLFHS AYTRTASYFE NSELAARGAP GEAEQAILAP FREELPEAVF EPYRPPVTDG
SGWNRENLLK ALRILKEAGW SVGDDGILRH RDSGRPLVFE LLLVNPSFER VALPFVQNLR
RIGVLARVRT VDTTQYQYRL DHFEFDMAVV VLPQSPSPGH EQAMYWSSEA ADEPGSRNYA
GVRDPVVDEL VERLVSAEDR DELVHLTRAL DRVLLAGHYV IPNWHTPVHR VAYWDKFGRP
ETAPKYGLGF DTWWVDPDKE QRLREANGPR SVR
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