Gene Hhal_0594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0594 
Symbol 
ID4709459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp669179 
End bp670771 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content71% 
IMG OID639855052 
ProductABC transporter related 
Protein accessionYP_001002182 
Protein GI121997395 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTGAGC CGTTGCTGAG CATCCGTGAC CTGCAGGTGG CCTTCGGCGA TGCTGCACCG 
GCGGTGCGCG GGGTGGATCT GGAGATCGCC GCTGGTGAGA CCGTCGGCCT GGTCGGGGAG
AGCGGCTCGG GTAAGTCGGT GACCGCGCAC TCGGTACTGC AGCTGCTGCC GTACCCGTGG
GCGCGGCATC CGGCCGGCTC GATCCGCTTC CGCGGCCGCG AGCTGCTCGG CGCTCCTGAG
CCGGTACTCC GCGAGCATCG CGGGGGGCGC ATCGGCATGA TCTTCCAGGA GCCGATGAGT
TCGCTCAATC CGCTGCACAC GGTGGAGAAG CAGATCCGCG AGACCCTGCT GGTCCATCGC
GGTCTGGACC GGACGGCAGC CCGGCGTCGG GTGCTGACCC TGCTCGAGCA GGTCCAGCTT
CCCGACCCGC AGCGGATGCT CACCGCCTAC CCCCACCAGC TCTCCGGTGG ACAGCGTCAG
CGGGTGATGA TCGCCATGGC CCTGGCCAAC GAGCCCGATC TGCTCATTGC TGACGAACCC
ACCACGGCCC TGGATGTGAC CGTTCAGTCG CAGATCCTGC GCCTGCTCGC CGACCTCCAG
GCGCGGCTGG GCATGGCCCT GCTGTTCATC ACCCACGACC TGGACGTGAT CCGGCTGGTG
GCCGATCGGG TCTGCGTCAT GCGCCAGGGC GAGATCGTCG AGCGCGCCGA GGCAAAGCGC
CTGTTCAGTC GTCCCGAGCA CCCCTACACC CGGCAGTTGC TGGCTGCCCG GCCCGCCGGG
GAGCCGGTGG CGGCCGACCC GCAGGCGCCC GCGCTCCTGC ACGGCGAGGG CATCCGGGTG
CACTTCCCGG TGCGCGGCGG CCTGCTGCGC CGACCGGTGG ACTGGGTCCG TGCCGTGGAT
GGCATCGACA TCACCCTGCG CGCCGGGCAG ACGGTGGCGG TGGTGGGCGA GAGCGGTTCC
GGCAAGTCGA CCCTGGGGCT GGCGCTGCTT CGTCTGGAGC GCAGCCACGG CTCCATCCGT
TTCCGCGGCG AGGAGCTACA AGGGCGCACG GCGCGGCAGC TGCGCCCCTA CCGCAGCGCC
CTGCAGATCG TCTTCCAGGA CCCCTACGGC AGCCTCTCGC CGCGCATGTC GGTGGGCGAC
ATCGTCGGCG AGGGGCTCGA CCTCCACCAT CCGCGCCTCG GTCGCGATGA GCGTAGGGCA
CGCATCGTGC GGGTGCTCGA AGAGGTCGGG CTCGACCCCG AGACCCGCCA TCGCTACCCC
CACGAGTTCT CCGGCGGGCA GCGTCAACGG ATTGCCATTG CCCGGGCGCT CGTCCTCGAG
CCGCAGGTGG TTGTTCTCGA CGAGCCGACC TCAGCGCTGG ATGTCTCGGT GCAGGCGCAG
ATCGTCGATC TGCTCCGCGA TCTGCAGCGC CGCCATGGCC TGGCCTACCT CTTCATCAGC
CACGACCTAC AGGTGGTCCG CGCCCTGGCC CACGAGGTCA TCGTCATGCG GGCCGGCCGG
GTGGTCGAGC GCGGGCCGGC CGCATCGGTG TTCGGCGCGC CGCAAACGGC GTACACCCAG
GCCCTCCTGG CTGCCGCCTT CCTCTCCAGC TGA
 
Protein sequence
MVEPLLSIRD LQVAFGDAAP AVRGVDLEIA AGETVGLVGE SGSGKSVTAH SVLQLLPYPW 
ARHPAGSIRF RGRELLGAPE PVLREHRGGR IGMIFQEPMS SLNPLHTVEK QIRETLLVHR
GLDRTAARRR VLTLLEQVQL PDPQRMLTAY PHQLSGGQRQ RVMIAMALAN EPDLLIADEP
TTALDVTVQS QILRLLADLQ ARLGMALLFI THDLDVIRLV ADRVCVMRQG EIVERAEAKR
LFSRPEHPYT RQLLAARPAG EPVAADPQAP ALLHGEGIRV HFPVRGGLLR RPVDWVRAVD
GIDITLRAGQ TVAVVGESGS GKSTLGLALL RLERSHGSIR FRGEELQGRT ARQLRPYRSA
LQIVFQDPYG SLSPRMSVGD IVGEGLDLHH PRLGRDERRA RIVRVLEEVG LDPETRHRYP
HEFSGGQRQR IAIARALVLE PQVVVLDEPT SALDVSVQAQ IVDLLRDLQR RHGLAYLFIS
HDLQVVRALA HEVIVMRAGR VVERGPAASV FGAPQTAYTQ ALLAAAFLSS