Gene Hhal_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0583 
Symbol 
ID4710647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp659674 
End bp660501 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID639855041 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001002171 
Protein GI121997384 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.373152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAGA CCGCCGCCGA GGCGACCCCT GCCGAGGATC CAGCCGGCGG CGGCGAGCCG 
GTGGCCCGCG TCGGCGATGA AGCGCTGCGG CGGCTGCCGG ACGACCTTTA CATCCCCCCG
GACGCCCTCG AGGTCTTCCT CGAGGCGTTC GAGGGGCCGC TGGACCTGCT CCTCTACCTG
ATCCGGCGAC AGAACCTCGA CATCCTCGAT ATCCCCATCG CCGAGATCAC ACGGCAGTAC
ATGGAGTATG TCGAGCTGAT GCGGGAGATG CGCCTGGAGC TGGCCGCCGA GTACCTGGTG
ATGGCGGCCA TGCTCGCGGA GATCAAATCG CGCATGCTGC TCCCCCGGCC GGCGGCGGCC
GAGGAGGACG AGGAGGAGGA CCACGACCCG CGGGCCGAGC TGATCCGTCG GCTGCAGGAG
TACGAGCGCT TCAAGAAGGT GGCCGAGCAG ATCGACGAAC TCCCCCGGGT GGGGCGGGAC
ATCTTCCCGG CGGCGGCCGA GGCGCCGGCG TGCCAGCCCC AGGCGCAACC GCCGGCGGTC
AGCCTGCGCG AGCTGGTGCT GGCCTTCTCG GAGGTCATGC GCCGGGCGCA GCTGAACGAG
AACCACCAGG TTGAGCGTGA GGCGATCAGC ATCCGTGAGC GGATGAGCGA TACCCTGAGT
CGGCTCAACA ATGAGCGCTA CACCCCGTTC CAGGCGCTGT TTCAGGTCGA GGAGGGGCGC
ACCGGAGTGG TCGTGACCTT CCTCGCGCTG CTCGAACTGG TGCGCGAGTC CATGGTGGAA
CTGGTCCAGG CCGACGCCTT TGCCCCGATC TATATCCGCG CGCGATGA
 
Protein sequence
MSETAAEATP AEDPAGGGEP VARVGDEALR RLPDDLYIPP DALEVFLEAF EGPLDLLLYL 
IRRQNLDILD IPIAEITRQY MEYVELMREM RLELAAEYLV MAAMLAEIKS RMLLPRPAAA
EEDEEEDHDP RAELIRRLQE YERFKKVAEQ IDELPRVGRD IFPAAAEAPA CQPQAQPPAV
SLRELVLAFS EVMRRAQLNE NHQVEREAIS IRERMSDTLS RLNNERYTPF QALFQVEEGR
TGVVVTFLAL LELVRESMVE LVQADAFAPI YIRAR