| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0576 |
|---|
| Symbol | |
|---|
| ID | 4710572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 654131 |
|---|
| End bp | 654823 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639855034 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_001002164 |
|---|
| Protein GI | 121997377 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.475969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCC GGCACGGCGT CCTCTTCGAT CTTGACGGCA CGCTGGTCGA CACGGCGCCG
GATCTGATCG CCTGCCTCCA GGGGTTACTC GCCGAGGCCG GCCGCACCCC GGCGCCTAGC
GCCGCCCTGC AGGCCACGGT CTCCCACGGG GCGCGGATCA TGGTCAGCCA CGCCTTTTCG
CTGCCCCCGA GTGATCCGCA CGCCGTCGCC CTGGAGCAGG AGCTGGTCCG GCGCTACCGG
GCCCGCATCG CCGATGAGAG CCGCCTGTTT CCGGGTATGG CGTCGGTACT CGACACCCTG
GAGGCCCAGG GCATCCCCTG GGGCATCGTG ACCAACAAGC CCACCGACCT CACGGAGCCA
CTGCTGGAGC GCCTGGGGCT GGATACCCGT GCCGGGGCCG TGGTTTGCGG CGACACCCTG
GCCCGGGCCA AACCCCACCC CGATCCGATC CGCCACGCCG CGGCCACCCT GGGCTGCCCG
CCCGAGGCGT GCTGGAGCCT GGGCGACGCC CGGCGGGATA TCGACGCCGC AGCGGCAGCC
GGCGCCCGAG GGCTGGTGGC GCTGTTCGGC TACCTCCACG CCGGCGATCG CCCCGCCCTG
TGGGGCGCCC ACGGGCTGAT CCGGCAACCC GCGGAGTTGC TGGGTTGGAT CGATCCGGGG
CTGAACGCCA GACTCGAACC TTCCACCGCC TAG
|
|---|
| Protein sequence | MTARHGVLFD LDGTLVDTAP DLIACLQGLL AEAGRTPAPS AALQATVSHG ARIMVSHAFS
LPPSDPHAVA LEQELVRRYR ARIADESRLF PGMASVLDTL EAQGIPWGIV TNKPTDLTEP
LLERLGLDTR AGAVVCGDTL ARAKPHPDPI RHAAATLGCP PEACWSLGDA RRDIDAAAAA
GARGLVALFG YLHAGDRPAL WGAHGLIRQP AELLGWIDPG LNARLEPSTA
|
|---|
| |