Gene Hhal_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0571 
Symbol 
ID4710575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp646287 
End bp648857 
Gene Length2571 bp 
Protein Length856 aa 
Translation table11 
GC content68% 
IMG OID639855029 
ProductDNA gyrase, A subunit 
Protein accessionYP_001002159 
Protein GI121997372 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.533459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCG TTGCCCGCGA GATCCTCCCT GTAAACCTCG AAGACGAGAT GCGGCAGTCG 
TACCTCGATT ACGCCATGAG CGTAATCGTC GGGCGTGCCC TTCCCGATGT CCGCGACGGC
CTCAAGCCCG TGCACCGGCG TGTTCTCTAC GCCATGCGCG AGCTGGGCAA CGACTACAAT
AAGCCGTACA AGAAGTCGGC GCGTGTGGTC GGTGACGTCA TCGGTAAGTA CCACCCCCAC
GGCGACGCCG CGGTCTACGA CACCATTGTG CGCCTGGCCC AGAGCTTTAG CATGCGCTAC
CGGCTGGTGG ACGGCCAGGG CAACTTCGGC TCCATCGATG GCGACTCGCC GGCGGCCATG
CGGTACACCG AGGTGCGCAT GGCGCGCCTG GCGCACGAGC TGCTGGCCGA TATCGACAAG
GAGACGGTGG ACTTCGTCGA CAACTACGAC GGCTCCGAGC AGGAGCCGCA CGTGTTGCCG
ACCCGGCTGC CCAACCTGTT GGTCAACGGC GGCTCCGGCA TCGCCGTGGG CATGGCCACC
AACATCCCGC CGCACAACCT GCGCGAGGTG ATCGACGCCT GCGTGGCCCT GGTCGACGAC
CCGGAACTGC CCGTCGAGTC GCTGATCGAG TATGTGCCGG CGCCGGATCT GCCCACCGGC
GGCATCATCT TCGGTACCGC GGGCATCCAT CAGGCCTTCC GCACTGGCCG CGGGCGCATG
GTCCTGCGCG CCCGCGCGGA GGTCGAGGAG ATGACCGCCG ACCGCGAGCG CATCGTGGTC
ACCGAGCTCC CCTACCAGGT CAACAAGGCG CGGCTGGTCG AGAAGATCGC CGAGCTGGTC
AAGGAGCGCC GCCTGGAGGG CATCTCCGAG CTGCGTGACG AATCCGACAA GGAAGGCATC
CGCATCGTCC TTGAGCTCAA GCGCGGCGAG GCCGGCGAGA TCGTCCTCAA CAACCTCTAC
CGCCACACCC AGATGCAGAC CGTCTTCGGC ATCAACGTGG TGGCACTGCA CGAAGGCCAG
CCGCGCACGC TCAACCTCAG GCAGGTGCTC GAGGCCTTCA TCCGCCACCG CCGCGAGGTG
GTCACCCGGC GGACCATCTA CGAGCTGCGC AAGGCCCGCG AGCGGGCCCA CGTGCTCGAG
GGGCTGGCGG TCGCCCTGGC CAACATCGAC GAGGTCATCG CCCTGATCAA GGGGTCCTCG
GGGCCGGCCG AGGCGAAGGC CGAGCTGGTC GCGCGTGAGT GGCGCCCGGG GGTGGTCACC
GAGATGCTCG AGCGCGCCGG TGCCGCCGCC ACCCGCCCGG AGGATCTGGC CGATCACTTC
GGCCTCGATG CCGACTCCGG CATCTACCGC CTCTCCGAGG CCCAGGCCCA GGCGATCCTC
GATCTGCGCC TGCACCGCTT GACGGCCATG GAGCAGGACA AGATCGTCGA GGAGTACAGC
AACCTCCTCG AGCGCATCGC CGAACTGATT CACATCCTCG ACAGCGGCGA GCGGCTGATG
GAGGTGATCC GCGAGGAGCT GGTGGCCATC CGCGATCAGT ACGGCGACGA GCGCAAGACC
GAGATCCGCG AGGACACCGC CGAGCTCTCG CTGGAGGACC TGATCAGCGA GGAGGACATG
GTGGTCACGC TCTCCCACCA CGGCTATGTC AAGGCGCAGC CGCTCGACGG CTACCGCGCG
CAGCGCCGTG GCGGGCGGGG CAAGAGCGCC ACCGCGATGA AGGACGAGGA CTTCATCGAC
AAGCTGTTCA TCGCCAACAC CCACGATACG CTGCTGTGCT TCTCGAGCAC CGGCAAGTGC
TACTGGCGCA AGGTCTACGA GCTCCCGCAG GGCAGCCGCA CCTCCCGTGG GCGGCCGATG
GTCAACCTGC TGCCGCTCGA AGAGGACGAG CGCATCAACG CCGTGGTCCC CGTTCGCGAG
TTCGACGAGG ACCACTTCGT GTTTATGGCC ACGCGCAACG GGACGGTCAA GAAGACGCCC
CTGTCGCACT TCTCGCGGCC GCGTTCGAGC GGGATCATCG CCGTGGAGCT GCGCGGCGAC
GACACCCTGG TGGATGCCGA GATCACCAAT GGGGATCGCG AGGTGATGCT GCTCTCCGAC
GCCGGCAAGG CGCTGCGCTT CCACGAGTCG GACGTGCGGG CCATGGGCCG CACGGCCGGC
GGCGTGCGGG GCATCCGCCT GGAGTCCGGG CAGCGGGTGA TCGCGCTGCT GATCCTTGGC
GAGGGCGATA TCCTCACCGC CACCGAGCAC GGCTACGGCA AGCGCACCCC GGTGGAGGAC
TACCCGCGGC GGGGCCGTGG CGGCATGGGT GTGATCTGCA TCCGGACCAC CGAGCGCAAC
GGCCGGGTGG TCGGCGCGGT GCAGGCCGCC GAGGACGACG AGATCATGCT GGTCAGCCGC
AGTGGCACGC TGGTCCGCAC GCCGGTGGCC GATGTCTCGC GGGTCGGGCG CAACACCCAG
GGGGTCAAGC TCATCAGCCT CGACGAGGCC GAGCAGTTGG TCGGCCTCGA GCGGGTCGAA
GGGCTCGCCG AGGGGGAGGC ACCGGAGGCG CCGGATGCGC CCGAGATGTA G
 
Protein sequence
MTGVAREILP VNLEDEMRQS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMRELGNDYN 
KPYKKSARVV GDVIGKYHPH GDAAVYDTIV RLAQSFSMRY RLVDGQGNFG SIDGDSPAAM
RYTEVRMARL AHELLADIDK ETVDFVDNYD GSEQEPHVLP TRLPNLLVNG GSGIAVGMAT
NIPPHNLREV IDACVALVDD PELPVESLIE YVPAPDLPTG GIIFGTAGIH QAFRTGRGRM
VLRARAEVEE MTADRERIVV TELPYQVNKA RLVEKIAELV KERRLEGISE LRDESDKEGI
RIVLELKRGE AGEIVLNNLY RHTQMQTVFG INVVALHEGQ PRTLNLRQVL EAFIRHRREV
VTRRTIYELR KARERAHVLE GLAVALANID EVIALIKGSS GPAEAKAELV AREWRPGVVT
EMLERAGAAA TRPEDLADHF GLDADSGIYR LSEAQAQAIL DLRLHRLTAM EQDKIVEEYS
NLLERIAELI HILDSGERLM EVIREELVAI RDQYGDERKT EIREDTAELS LEDLISEEDM
VVTLSHHGYV KAQPLDGYRA QRRGGRGKSA TAMKDEDFID KLFIANTHDT LLCFSSTGKC
YWRKVYELPQ GSRTSRGRPM VNLLPLEEDE RINAVVPVRE FDEDHFVFMA TRNGTVKKTP
LSHFSRPRSS GIIAVELRGD DTLVDAEITN GDREVMLLSD AGKALRFHES DVRAMGRTAG
GVRGIRLESG QRVIALLILG EGDILTATEH GYGKRTPVED YPRRGRGGMG VICIRTTERN
GRVVGAVQAA EDDEIMLVSR SGTLVRTPVA DVSRVGRNTQ GVKLISLDEA EQLVGLERVE
GLAEGEAPEA PDAPEM