Gene Hhal_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0570 
Symbol 
ID4709548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp645132 
End bp646211 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID639855028 
Productphosphoserine aminotransferase 
Protein accessionYP_001002158 
Protein GI121997371 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAG TCTTCAACTT CAGTGCCGGC CCGGCCATGC TCCCCGAGGC GGTGATGCGC 
CAGGCCGCCG AGGAGATGCT CGATTGGCAG GGCACCGGCA TGTCGGTCAT GGAGATGAGC
CACCGTGGCA AGGCATACGT CTCCATCGCC GAGAAGGCCG AGGCCGATCT GCGGGCGTTG
CTGCAGATCC CGGACAACTA CAAGGTCCTG TTCCTGCAGG GCGGGGCCAC CGGACAGTTC
TCGGCCATCC CCATGAACCT GCTGCGTGGC GGCAAGCGCG CCGACTACAT CTACACCGGT
CAGTGGTCGA AGAAGGCCAT CGCCGAGGCG AAGAAGTTCT GCGAGGTCAA CGTTGCCGCC
TCCGGCGAGC CGGACATGAT GCACGTGCCG CCGCAGTCGC AGTGGCAGCT CTCCGACGAC
GCCGCCTACG TCCACTTCAC CCCCAACGAG ACCATCAGCG GCGTGGAGTT CCACTGGCTG
CCCGACGTCG GCGACAAGCC GCTGGTGGCG GACATGTCCT CGACGCTGCT GTCGCGGCCG
ATCGACGTCA GCCGCTACGG GCTGATCTAC GCCGGGGCGC AGAAGAACAT CGGCCCGGCC
GGCGTGACCC TGGTGATCGT CCGCGAGGAC CTGCTCGGCG AGGCGATGCC GCAGACGCCC
ACGGTCTGGG ACTACCAGCA GCAGGTCGAC GCCGACTCCA TGCTCAACAC CCCCGCTACG
TATCCGCTCT ACATCGCCGG GCTGGTGTTC CAGTGGCTGA AGGACCTCGG CGGTCTCGAG
GCCATGGCCG AGATCAACCA CCGCAAGGCG CAGAAGCTCT ACGACGCTAT CGACGCCTCG
CCGTTCTACT CGAACCCGGT GGATCCGCAG GCGCGCTCGT GGATGAACGT GCCCTTTGTC
CTGGCCGATG ACGGCCTCGA CAAGCTCTTC CTCGAGGAGG CCGAGGCCGC CGGTCTGACC
ACGCTCAAGG GGCACCGCTC GGTGGGTGGC ATGCGGGCCT CAATCTACAA TGCCATGCCG
GAGGCCGGCG TGGACCGGCT CGTCGAGTTC ATGGCCGATT TCGAGAGGCG AAACGGGTGA
 
Protein sequence
MSRVFNFSAG PAMLPEAVMR QAAEEMLDWQ GTGMSVMEMS HRGKAYVSIA EKAEADLRAL 
LQIPDNYKVL FLQGGATGQF SAIPMNLLRG GKRADYIYTG QWSKKAIAEA KKFCEVNVAA
SGEPDMMHVP PQSQWQLSDD AAYVHFTPNE TISGVEFHWL PDVGDKPLVA DMSSTLLSRP
IDVSRYGLIY AGAQKNIGPA GVTLVIVRED LLGEAMPQTP TVWDYQQQVD ADSMLNTPAT
YPLYIAGLVF QWLKDLGGLE AMAEINHRKA QKLYDAIDAS PFYSNPVDPQ ARSWMNVPFV
LADDGLDKLF LEEAEAAGLT TLKGHRSVGG MRASIYNAMP EAGVDRLVEF MADFERRNG