| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0566 |
|---|
| Symbol | |
|---|
| ID | 4709626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 640838 |
|---|
| End bp | 641713 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639855024 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_001002154 |
|---|
| Protein GI | 121997367 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGGC GTCTGGCCAT CATCGGCGTC GGCCTGATCG GCGGCTCGCT GGCCCTGTCG
CTGCGCCGCA GCGGGGCGGT CGAGGAGGTG ATCGGCTGCG GGCGCAGCGC CGAGAACCTG
GAGCGGGCCC AGGCCCTGGG GGTGATCGAC CGCGGTTGTC ACGATCCGGC CGAAGCCGCC
GCCGGGGCCG ACCTGGTGGT GATCTGCGTC CCCCTGCGTG CCATGCGCGG TGTCTTTGCC
GCCCTGGAGC ATGCGGTGGA GCCCGGGACC GTGGTTACCG ACGCCGGCAG CGTAAAGGGC
TCGGTGGTCG AGGATGCCCG GGCTGTCTTT GGTACCCCGC CGCCGTGGCT GGTGCCCGGC
CATCCCATCG CCGGCACCGA GAACAGCGGC GTCGAGGCCG CCTTTGCCGA ACTCTACGAC
CGGCGTCGGG TGATCCTGAC CCCCACGCCG CAGAACCCGC AAGACGCCGT GGAGCGGGTC
GCCGCCATGT GGCGCGCCGC CGGTGCGCAG GTCGTGCGCA TGGAGGCCGA CCACCACGAC
GAGGTGCTGG CGGCCACCTC CCACCTGCCG CATGCGCTGG CCTACGCGCT GGTGGATGCC
CTGGCCGGCT GGGACGATCG TCAGGAGATC TTCGAGTACG CTGCCGGCGG CTTCCGGGAC
TTCACTCGCA TCGCCTCTTC GGACCCGGCC ATGTGGCGGG ATATCTGTAC TGCCAATCGC
GACCATCTGG TCGCGGCGCT GCGCCGGTAC CAGCAGGACC TGGGGCGGCT GACCGATGCG
TTGGCCGCCG GCGACGACGA GCAGGTCCTG CGTGTCTTCG AAAACGCCCA GGAGGCCCGC
GCCGGCTTCC TGCGCCTGCT GGAGGGCCGC TCGTGA
|
|---|
| Protein sequence | MIRRLAIIGV GLIGGSLALS LRRSGAVEEV IGCGRSAENL ERAQALGVID RGCHDPAEAA
AGADLVVICV PLRAMRGVFA ALEHAVEPGT VVTDAGSVKG SVVEDARAVF GTPPPWLVPG
HPIAGTENSG VEAAFAELYD RRRVILTPTP QNPQDAVERV AAMWRAAGAQ VVRMEADHHD
EVLAATSHLP HALAYALVDA LAGWDDRQEI FEYAAGGFRD FTRIASSDPA MWRDICTANR
DHLVAALRRY QQDLGRLTDA LAAGDDEQVL RVFENAQEAR AGFLRLLEGR S
|
|---|
| |