| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0563 |
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| Symbol | rpsA |
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| ID | 4710834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 636959 |
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| End bp | 638641 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639855021 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001002151 |
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| Protein GI | 121997364 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.647894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAA GCTTTGCGGA ACTCTTTGAG GAGAGCCTTG CGAACACCGA TATGCGGCCT
GGCGCCATTG TTACGGCGAA GGTCATGGGG ATCGACAACG AGGACGTGAT CGTCAACGCC
GGTCTCAAGT CCGAGGCGGT GATCCCTGTC TCGCAGTTCT ATGACGAGGC CGGCAACCTA
GAGGTGAGCG TCGGCGACGA GGTCGAGGTG GCCCTCGACA CCGTCGAGGA CGGCTTCGGC
GAGACGCGGC TCTCCCGCGA GCGGGCCAAG CGCGCCTACG CCTGGCGCGC CCTCGAGCAG
GCCTACGAGA ACAGCGAGAC CGTGTCCGGT CAGATCAGCG GCAAGGTCAA GGGCGGCTTC
ACCGTCGATC TGGGCCACAT CCGCGCCTTC CTGCCGGGAT CCCTGGTGGA CATCCGCCCG
GTGCGCGACA CCACCTACCT GGAAGGCAAG GACCTCGAGT TCAAGGTCAT CAAGCTCGAC
GCCCGTCGCA ACAACGTGGT GGTCTCCCGC CGCGCGGTGG TCGAGGAGGA GTACAGCGCC
GAGCGCGAGG CGCTGCTCGA GAAGCTGCAG GAGGGCGAGA CCCTCAAGGG TATCGTCAAG
AACCTGACCG ACTACGGCGC CTTCGTCGAC CTCGGCGGGA TCGACGGGCT GCTGCACATC
ACCGACATGG CCTGGCGGCG CGTCAAGAAC CCCTCCGAGG TGGTGGAAGT CGGCCAGGAG
ATCGAGGTCA AAGTCCTCAA GTTCGACCGC GAGCGCAACC GCGTCTCCCT CGGTCTCAAG
CAGCTCGGCG CCGACCCGTG GGAGGCCATC GCCCAGCGCT ACCCCGAGGG TGCGCGCGTC
CCGGGCAAGG TCACCAACAT CACCGAGTAC GGCTGCTTCG TCGAGATCGA AGAGGGTGTC
GAGGGCCTGG TCCACGTCTC CGAGATGGAC TGGACCAACA AGAACGTCAA CCCGGCCAAG
CTGGTGGCCG TTGGCGACGA CGTCGAGGTG ATGATCCTCG ACATCGACGA GGAGCGCCGC
CGCATCTCCC TGGGCATGAA GCAGTGCCAG CCGAACCCCT GGGATGAGTT CGCCGCCAAG
TACGCCAAGG GGGACCGGGT GGTCGGCCAG ATCAAGTCGA TCACCGACTT CGGCATCTTC
GTTGGCCTCG AGGGCGGTAT CGACGGCCTG GTCCACCTCT CCGACCTGTC CTGGGACGAG
GCCGGCGAGG AGGCGGTGCG CAACTACCGC AAGGGCGAGG AGGTCGAGAC CGTTGTCCTC
TCCATCGATC CCGAGCGCGA GCGCATCTCT CTGGGCATCA AGCAGCTCGA GCAGGATCCG
CTGAGCCAGT GGCTGGCTGA TCACCAGAAG GGCGCCACCG TCAACGCCAA GGTCCTCTCC
GTCGAGGCCA AGGGCGCCAC GCTGGACGTC GGCGGCGGGG TCGAGGGCTA CATCCGCGCC
TCCGACCTGG CCAAGGAGCG CGTCGAGGAC GCCCGTTCGG TCCTCGAGGA GGGCCAGGAT
CTGGAGGCCA AGTTCGTCGG CGTCGATCGT CGCAACCGGA CCGTCAACCT CTCCCTGCGT
GCCCAGGAGG CCGAGGAGGA GCAGGTGGCC GTGCAGGAGC ACGCCCGTCC GGGGCCAAGT
GCCGGCACCA CGCAGCTCGG CGATCTGCTC AAGGAGCAGA TGAAGGGCAA TCAGGACAAC
TGA
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| Protein sequence | MTESFAELFE ESLANTDMRP GAIVTAKVMG IDNEDVIVNA GLKSEAVIPV SQFYDEAGNL
EVSVGDEVEV ALDTVEDGFG ETRLSRERAK RAYAWRALEQ AYENSETVSG QISGKVKGGF
TVDLGHIRAF LPGSLVDIRP VRDTTYLEGK DLEFKVIKLD ARRNNVVVSR RAVVEEEYSA
EREALLEKLQ EGETLKGIVK NLTDYGAFVD LGGIDGLLHI TDMAWRRVKN PSEVVEVGQE
IEVKVLKFDR ERNRVSLGLK QLGADPWEAI AQRYPEGARV PGKVTNITEY GCFVEIEEGV
EGLVHVSEMD WTNKNVNPAK LVAVGDDVEV MILDIDEERR RISLGMKQCQ PNPWDEFAAK
YAKGDRVVGQ IKSITDFGIF VGLEGGIDGL VHLSDLSWDE AGEEAVRNYR KGEEVETVVL
SIDPERERIS LGIKQLEQDP LSQWLADHQK GATVNAKVLS VEAKGATLDV GGGVEGYIRA
SDLAKERVED ARSVLEEGQD LEAKFVGVDR RNRTVNLSLR AQEAEEEQVA VQEHARPGPS
AGTTQLGDLL KEQMKGNQDN
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