| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0548 |
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| Symbol | |
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| ID | 4709732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 617781 |
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| End bp | 619313 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855006 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001002136 |
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| Protein GI | 121997349 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0362545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAC AGGAAGAGAA CTCGGTGCGG GAGTCCGAGA TCCCGCTTCC CAGCGTGACC
ACAGCCCTCC TGCCCATCGC CTTCACCATG GGCTTGATGG TCTTCCAGAT CCTCGCCTTC
GACGACTTCG TCCCCCACGT CCCGCTGGCC CTGGGCATCG CCTTCACCGG CCTGCTCGGC
TGGTACCACG GCATCCGCTG GTGGCGGATG GAGAACGGGC TCTACCACGT GGTGCACATC
GGCCTGCAGT CGGTGGCCAT CCTCATCACG GTGGGCATGA TCATCGGTAC GTGGATCCTC
TCCGGCACGG TGCCGCTGCT CATCTACTAC GGGCTGCTGC TGATCACCCC GGAGCTGTTC
CTGCTCGCTG CCATGATCCT CACCGCCGTG GTCTCCATGG CCGTGGGCAC CTCCTGGGGC
ACGGTAGGCA CCGTGGGCCT GGCCCTGGTC GGCGTCGGCG AGGGGTTGGG CATCCCGCTG
GCCCTGACCG GCGGCGCCAT CGTCTCTGGC GCCTTTTTCG GCGATAAGAT GTCGCCGCTG
TCGGATACCA CCAACCTTGC GCCGGCGGTG ACCGGCACCA ACCTGTTCAG CCACATCCGC
AACATGATGG CCACCTCCGT GCCCGCGCTG ATCGTGGCCG GCGCGGCCTA CTGGGTCATC
GGCTTCGGCT ACGCCGGCAC GGACCTGGAA ACCGGGCGCA TCGAGACCAT CCTCGAGGGC
CTGGAGGCAC AGTTCACCCT GCACCCGGTC CTGCTGCTGC CGGCGGTGCT GGTCATGGCG
CTGGCGCTGA TGCGCTTCCC GGTGCTACCC ACCCTCTTCT CCGGTGCCGT GGCCGGTGCG
GTGATGGCGG TCCTCGTCCA GGGCACCGAC GTCGCCGCCG CGGTGATGGC CATGCAGGAC
GGCTTCGTCA GCGAAACCGG TGTGGAGTCA GTGGACGATC TGCTCTCCAC CGGCGGCATC
CAGTCGATGA TGTGGACCAT CTCGCTGGTG CTGATCGCGC TGGCCTTCGG CGGCATCCTG
GAGCAGACGC GCAGCGTCGA GGCGGTCCTG AACGCCATCA TCCAGCGAAT CCGCGGCCGC
TTCTCGCTGT TCGCCGCCAG CACTGGTAGC TCCGCCGGCA CTAACCTCAT CTCCGGCGAC
CCGTACCTGT CCATCGCGCT GCCGGGGCGG ATGTTCGCGC CGGTCTACCG GGGGCAGGGG
CAGTCGACCC TCAACCTGTC GCGTTCGGTG GAGGAAGGCG GGACGATGAT CAACCCGCTG
ATCCCATGGG GCGCAGGCGG CGCCTTTACC GCCGGAGCCC TGGGTATCCC CACCCTGGTC
TACGCGCCGT TCGCCATCGT CTGCTGGCTG TCGCCGATCA TCGGCCTGTT CTTCGCGGCC
ACCGGGTGGT TCATGCCCCG GGCCAGCGAG GAGGAGCAGC GCCGCTGGCA AGACAACCAT
GAGTCGATCA TGGTCCAGGG CGGTGTGGTT AACTCCGCCG ATCTCGACCC CGAGGAGCTG
GAGCGGGCCT TCGACCGCTA CCGGCGACGC TAA
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| Protein sequence | MSEQEENSVR ESEIPLPSVT TALLPIAFTM GLMVFQILAF DDFVPHVPLA LGIAFTGLLG
WYHGIRWWRM ENGLYHVVHI GLQSVAILIT VGMIIGTWIL SGTVPLLIYY GLLLITPELF
LLAAMILTAV VSMAVGTSWG TVGTVGLALV GVGEGLGIPL ALTGGAIVSG AFFGDKMSPL
SDTTNLAPAV TGTNLFSHIR NMMATSVPAL IVAGAAYWVI GFGYAGTDLE TGRIETILEG
LEAQFTLHPV LLLPAVLVMA LALMRFPVLP TLFSGAVAGA VMAVLVQGTD VAAAVMAMQD
GFVSETGVES VDDLLSTGGI QSMMWTISLV LIALAFGGIL EQTRSVEAVL NAIIQRIRGR
FSLFAASTGS SAGTNLISGD PYLSIALPGR MFAPVYRGQG QSTLNLSRSV EEGGTMINPL
IPWGAGGAFT AGALGIPTLV YAPFAIVCWL SPIIGLFFAA TGWFMPRASE EEQRRWQDNH
ESIMVQGGVV NSADLDPEEL ERAFDRYRRR
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