| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0538 |
|---|
| Symbol | |
|---|
| ID | 4710196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 607548 |
|---|
| End bp | 608300 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639854995 |
|---|
| Product | FeS assembly ATPase SufC |
|---|
| Protein accession | YP_001002126 |
|---|
| Protein GI | 121997339 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.703052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGA TCAACAACCT CCATGCCAGC GTCGAGGCGA CCGAGATCCT CAAGGGCATC
GATTTCGAGA TGGGCCCCGG CGAGGTCCAC GCCATCATGG GGCCCAACGG CTCGGGCAAG
AGCACGCTGT CCAAGATCCT CGCCGGCGAC GAGAGCTACG AGGTCACTGA CGGCTCGGTG
ACCTTCGACG GGCAGGACCT GTTCGAGATG GAGCCCGAGG AGCGGGCCCG GGCCGGTGTC
TTCCTCGGCT TCCAGTACCC TGTGGAGATC CCCGGGGTGA GCAACAGCTA CTTCCTCAAG
GCTGCCGTCA ACGCCGCCCG CGAGGCTCGG GGCGAGGGCG AGATCGACCC GGTCAGCTTC
CTCAAGATGG CCCGCGAGCG GGCGCAGTGG GTGAAGCTGG ATGAGTCGCT GCTCAGCCGG
CCGGTCAATG CCGGCTTCTC CGGCGGCGAG AAGAAGCGCA ACGAGATCTT CCACATGGCC
ATGCTTGAGC CGCGGCTGTG CATCCTCGAC GAGACCGACT CGGGGCTGGA CATCGACGCG
CTGCGTGCCG TGGCCGATGG CGTGAACAGC ATGCGCGATC CGCAGCGCTC GTTTCTGATT
ATCACCCACT ACCAGCGGCT GCTCAGCTAC ATCGTGCCGG ACCATGTGCA CGTCATGGTC
AACGGGCGCA TCGTGCGCTC CGGCGGCAAG GAGCTGGCCG AGGAGCTGGA GCGGACCGGC
TACGCTCTGT TCGAGGACGA GGAGGCTGCC TGA
|
|---|
| Protein sequence | MLKINNLHAS VEATEILKGI DFEMGPGEVH AIMGPNGSGK STLSKILAGD ESYEVTDGSV
TFDGQDLFEM EPEERARAGV FLGFQYPVEI PGVSNSYFLK AAVNAAREAR GEGEIDPVSF
LKMARERAQW VKLDESLLSR PVNAGFSGGE KKRNEIFHMA MLEPRLCILD ETDSGLDIDA
LRAVADGVNS MRDPQRSFLI ITHYQRLLSY IVPDHVHVMV NGRIVRSGGK ELAEELERTG
YALFEDEEAA
|
|---|
| |