Gene Hhal_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0537 
Symbol 
ID4710195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp606209 
End bp607546 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content70% 
IMG OID639854994 
ProductFeS assembly protein SufD 
Protein accessionYP_001002125 
Protein GI121997338 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCAG TGGAAGAGCT CAAGAGCGTG CCCCGCGCCG TCTTCGACGG CCGTACGGCA 
CGGGGGCCGG AGTGGCTGGC CGAGCGCCGC CGCGCGGCCA TGGCCACCTT CGATGCCCAC
GGCTTCCCGA CCCGACGCTG GGAGGCGTGG AAGCACATCG ATCTGACCCC GGTGCTGCGC
AGCGACTTTC ATCCGCCGCA GACCGCCGGG GCGGTGGATG ACGGTCTCGC CGGCCGGGTC
GATCAGCTCC TGCCGCGCTC GGATGGGCCG CGGCTGGTCT TCATCGATGG TTACCTGGAT
GCATCGCGTT CGGACTACGC CGAACTGCCG GCCGGCCTCT CCGTCCAGCC CCTGAGCCAG
GCGCTGGCCG ACGACGTGGC GTGGCTGCAG CAGCACCTGG CGGCCCATGC CGACCCGGCC
AACAGCCCCT TCATTGCCCT CAACACGGCA CTGATGGACG AAGGGGTGGC GATCCACGTT
GCCCGCGGGG CGATGATCGA GGCGCCACTG CTGATTGTCT GCTACACCAG TGCGGCCTGC
GCCGGGCACG CCGTCTATCC GCGGGTGATC GTCCACGGTG AGGAGGCCAG CCACCTGCGC
GTGGTGGAGT ACCACAGCGG TGACCCTGAG GCCGCCTACC TAAGCTGCCC GGTCACCGAG
TTGGTGGCCG ATGCCGGCGC CCAGGTGGAT CTGACCCGGA TCAGCGAAGA GGGCGATGCC
GGCTGCCAAC TTGGCGCGGT CAGCGGCACC GCCGCGCGCG ACGCCCGGGT CGGCGCCCAC
TCCTTCGTCT GGGGGGGCGA CAAGGTGCGC GTGGACATCG AGGCGACGGT CCAGGGCGAC
AACGGCGAGG GGGATCTCAC CGGGGTCCAC CTCAGTGACG GCCAGCGCTT CGTGGACCAC
CACACCTGGG TCCACCACGA CGCCGAGCAC ACCCGCAGCC GTCAGGTCTT CAAGGGGGTG
CTCGACGGCC GCTCGGAGAG CGTCTTCGAT GGACTGATCA AGGTCCACCC GGGGGCGCAG
AAGACCGACG CGGAGCAGGA GAACCGCAAC CTGCTCCTCA GCCCGCGGGC GTTCGCGCAC
TCCAATCCGC GCCTGGAGAT CTTCGCCGAC GACGTCCGCT GCACCCACGG CTCCACCGTG
GGGGAGCTCG ACGAGCAGGC GCTGTTCTAC ATGCGCGCCC GCGGCATCGA TCCGCTGGTG
GCCAAAAGCC TGCTTACCTA CGCCTTTGTC GCCGAAGTCC TGGAGACCGT GCGCTGTTCG
CAGGCCGCCG ACTACGAGCG TGCGCTCCTG CGTCGGTTTC TGCCCGGTGG CGAGCAACTG
GAGGGGTTCG AGGCATGA
 
Protein sequence
MGAVEELKSV PRAVFDGRTA RGPEWLAERR RAAMATFDAH GFPTRRWEAW KHIDLTPVLR 
SDFHPPQTAG AVDDGLAGRV DQLLPRSDGP RLVFIDGYLD ASRSDYAELP AGLSVQPLSQ
ALADDVAWLQ QHLAAHADPA NSPFIALNTA LMDEGVAIHV ARGAMIEAPL LIVCYTSAAC
AGHAVYPRVI VHGEEASHLR VVEYHSGDPE AAYLSCPVTE LVADAGAQVD LTRISEEGDA
GCQLGAVSGT AARDARVGAH SFVWGGDKVR VDIEATVQGD NGEGDLTGVH LSDGQRFVDH
HTWVHHDAEH TRSRQVFKGV LDGRSESVFD GLIKVHPGAQ KTDAEQENRN LLLSPRAFAH
SNPRLEIFAD DVRCTHGSTV GELDEQALFY MRARGIDPLV AKSLLTYAFV AEVLETVRCS
QAADYERALL RRFLPGGEQL EGFEA