Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0522 |
Symbol | |
ID | 4710774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 593585 |
End bp | 594520 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639854980 |
Product | putative CheW protein |
Protein accession | YP_001002111 |
Protein GI | 121997324 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGAA TCATGAGCTC CGTCGACCAG CGGACCCAGC TGGCCGGCCA TAACCGCATG GAGTTGCTGC TCTTCCGCTT CGAGGGGCGG CAGCGCTACG GGATCAACGT GTTCAAGGTC CGCGAGGTCA TTCCCGCGCC GGAGCTGAGC TACGTGCCCC ACGCCCATCC GGCCTCCTGC GGCATCGCCT ACATCCGCGG CCACACGCTC TCGGTTCTGG ACCTTAGCTA CGCCACTGGT AACGGTCCCG TCACCAAGGA AGAGGGCAAC TACATCATCG TCACCGAGTA CAACCGTCAG GTCCAGGGGT TCCTGGTCGG CGGTGTGGAC CGGATCGTCA ACATCAACTG GCAGGATGTC CTTCCGCCGC CGAGTGGCGG CAGCGCCGGC AGCTACCTGA CCGCCGTGGC GCGCTACGAT GGACAAATGA TCCAGATCGT CGACGTCGAG AAGGTCCTGG CCGAGGTCCA GCGCGCCGGC GGCGCCGATC CCGAGGTCAC CGAGGGCGGC GGTGTGGATC GTGCCGAGGG GTCTGAGGCT TACAAGGTCC TGGTGGTGGA CGACTCGGCG GTGGCTCGGG GGCAGATCAA ACGCACCCTC GAGGAGATCG GCGTGCGCGT AGTCACCAAG AACAACGGGC GCGAAGCGCT GGAGCAGCTG CGCGCCTGGA AGGACCAGGA CCCCTCGGGG CTCCGCGATC TGCTGATGGT GGTCTCCGAT ATCGAGATGC CGGTGCTCGA CGGCTATACC CTGACGCGCT CCATCCGGCA GGATCCGGGG CTTTCCGGGG TTCACGTCTT GCTCCACTCC TCGCTCAGCG GTGTGTTCAA CACCGAGATG GTGCGCCGGG TGGGAGCCGA CGAGTTCCTG GCCAAGTTCC ACTCCCAGGA GCTGGCCGAG CGGGTCGGCG CCCGGCTGGC CGAGCGAGGT GGGTGA
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Protein sequence | MAGIMSSVDQ RTQLAGHNRM ELLLFRFEGR QRYGINVFKV REVIPAPELS YVPHAHPASC GIAYIRGHTL SVLDLSYATG NGPVTKEEGN YIIVTEYNRQ VQGFLVGGVD RIVNINWQDV LPPPSGGSAG SYLTAVARYD GQMIQIVDVE KVLAEVQRAG GADPEVTEGG GVDRAEGSEA YKVLVVDDSA VARGQIKRTL EEIGVRVVTK NNGREALEQL RAWKDQDPSG LRDLLMVVSD IEMPVLDGYT LTRSIRQDPG LSGVHVLLHS SLSGVFNTEM VRRVGADEFL AKFHSQELAE RVGARLAERG G
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