Gene Hhal_0514 details

Gene Information

• Locus tag: Hhal_0514
• ID: 4710559
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 587096
• End bp: 587782
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639854972
• Product: flagellar L-ring protein
• Protein accession: YP_001002103
• Protein GI: 121997316
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.100607
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGCAC GGCCTCGGCT GATACGCGGT TGCGCCGCGG CCCTGGTGGC CGGGGTGGCA 
GCGGCGGCGT GTACGCCGTT GCCGCAAGAG GCGCCGGAGC CGTCGCCGAT CACGGCGCCG 
CGGGTCGATG TCCCCGACGA CCCGGACGAG CGCACCGGCT CGGTCTTCGA CGAGGAGCGC 
AGCATGCGCC TCTTCGAGGA CCGCAGCGCG CGACGCACTG GTGATCTGAT CACGGTGGTC 
ATCGAGGAAG AGATCGCCGG TGATCGCTCG ATCAATTCGG AGATGGCGCG CCAGCAGGAG 
GCGGACATGC CCGCGCCGCA GATCGGCGGC GAGGACCTGG AGATCTTCGG CCGCCCCTTC 
GCCTTCGAAC AGGAGGGTGA GGCGAGTTTC GAGGGCGGTG GCAGCGCGGA CCAAGAGACC 
AATCTCACCG GGACCATCAA TGCCGTGGTG GTGGACACCA CCCCCAATGG CCATTTGGTC 
ATACGCGGCG AGAAGAACGT GCGGGTGAGC CAGGGTCAGG AGACGTTGCG GATCTCCGGG 
ATCGTGCGGA CTGACGATGT GGGGGCGAAC AACGAGGTCT CGTCCAATCG GGTGGCGAAC 
ATGCAGGTCG GCTACACCGG CGAGGAGGCG CTCAGTGACT CGGCGCAGCC AGGGTGGCTG 
ACGCGTTTCC TGATGAGGCG CTACTGA 

 

Protein sequence

MGARPRLIRG CAAALVAGVA AAACTPLPQE APEPSPITAP RVDVPDDPDE RTGSVFDEER 
SMRLFEDRSA RRTGDLITVV IEEEIAGDRS INSEMARQQE ADMPAPQIGG EDLEIFGRPF 
AFEQEGEASF EGGGSADQET NLTGTINAVV VDTTPNGHLV IRGEKNVRVS QGQETLRISG 
IVRTDDVGAN NEVSSNRVAN MQVGYTGEEA LSDSAQPGWL TRFLMRRY