Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0512 |
Symbol | |
ID | 4710928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 584933 |
End bp | 585919 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639854970 |
Product | flagellar rod assembly protein/muramidase FlgJ |
Protein accession | YP_001002101 |
Protein GI | 121997314 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1705] Muramidase (flagellum-specific) |
TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.2841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACAACG CCGGCGGCGC CCTTGGTAAC GCCCTTGAAC CCCAGGGGCT GCAGCAGCTT CGCTCGATGA CGCGCAACCC CAGCGAGGAG GACCTCGCCG AGGTGGCGCG GCAGTTCGAG GCGGTCTTCG TCGAGATGAT GCTCGGCCAG ATGCGCCAGG CGACCCCGGG CGACGAGATC TTCGGCGGCA ACGCCGAGGA GACCTACCGC GATCTGTTCG ATCGGCAGAT GGCGGTGCAG ATGTCCCGCG AGGGCGGGGG CATGGGCCTG GCCCCGATGA TCGAGGAGCA GCTGCGCGAG AACGCCGGCT TCGAGACCGA CCGCACCCAG GGGCTGCCCC GGGATGTCGC CGACTACCGC CACTCGGCGG TGCCCGTCCA GCCCGACGAC GAAGAGCGGG CAGCGGCCGC CGAAGAGGGG GACGAGACGG GCCGTGGTGG CGGTCTCGGC GGCAAGGGGG CCGGCTGGTC GAGCCCGCAG GCCTTCGTCG AGGAGATCAC CCCGGCGGCC AAGGAGACCG CCGAGCGCCT GGGGGTGCCG GCGGTGGCCC TGGTGGCCCA GGCAGCCCTG GAGACCGGCT GGGGGCAGCA CATGGTGGCC GACAGCGACG GGCGCAGCTC CAACAACCTG TTTAACATCA AGGCCCACTC GGCGGATTGG CAGGGCGATG CCGTACGGGT GCCCACCCTC GAGTACCGCA ACGGCATCCC CCAGCGCGAG ATGGCCGACT TCCGCGCCTA CGAGTCGGTG GCGGACAGCT TCGCCGACTA CGCCGACTTC CTCGAGCGCA ACCCGCGCTA TCGCGAGGCG CTGGAGGTTG GCGAGGACGC CGGGCAGTAT GTCGAGGCCC TGCAGCGGGC CGGGTACGCC ACCGATCCGC AGTACGCCGA GAAGCTGCAG CGGATCATGG AGCTCGGCGA CGACAGTCAC GGGGTGCGGA TTGGAGGCGA GACCCTCAAG ATTTCCGATT CCGTGCCGAA AGGCTAG
|
Protein sequence | MHNAGGALGN ALEPQGLQQL RSMTRNPSEE DLAEVARQFE AVFVEMMLGQ MRQATPGDEI FGGNAEETYR DLFDRQMAVQ MSREGGGMGL APMIEEQLRE NAGFETDRTQ GLPRDVADYR HSAVPVQPDD EERAAAAEEG DETGRGGGLG GKGAGWSSPQ AFVEEITPAA KETAERLGVP AVALVAQAAL ETGWGQHMVA DSDGRSSNNL FNIKAHSADW QGDAVRVPTL EYRNGIPQRE MADFRAYESV ADSFADYADF LERNPRYREA LEVGEDAGQY VEALQRAGYA TDPQYAEKLQ RIMELGDDSH GVRIGGETLK ISDSVPKG
|
| |