Gene Hhal_0503 details

Gene Information

• Locus tag: Hhal_0503
• ID: 4709762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 571974
• End bp: 572396
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639854961
• Product: flagellar protein FliS
• Protein accession: YP_001002092
• Protein GI: 121997305
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCGCG GCATAAACCA ATACCAACAA GTCGGGACCT ACTCCAGCGC GGCCTACGCC 
GACCCTTACC GGTTGGTGCA GTTGCTCATG GACGGGTTTC TGGATCGCGT GGCCCAGGCC 
CGCGGCGCCA TGGAGCGCCA GGAGATCGCG GTCAAGGGTG AGTTGATCAG CAAGGCCATC 
TCCATCCTCG ACGGCCTGCG TTCCGGGCTC GACCACGAGC GCGGCGCCGA AATCGCCGGC 
AACCTGGAGG AGCTGTACAC CTACATGCAG CGCCGCCTGG TCGAGGCGAA TGCGCAGAAC 
GAGGTGCAGT ATCTGGACGA GGTCGCCTCC TTGATGCGCG AGATCAAGAG CGCCTGGGAC 
GCCATCCCAC CGGAGGTGCG GACCCGCGAG GCCGCCGCGG CGGCCGCCGC CCGCGGCGAG 
TAG 

 

Protein sequence

MHRGINQYQQ VGTYSSAAYA DPYRLVQLLM DGFLDRVAQA RGAMERQEIA VKGELISKAI 
SILDGLRSGL DHERGAEIAG NLEELYTYMQ RRLVEANAQN EVQYLDEVAS LMREIKSAWD 
AIPPEVRTRE AAAAAAARGE