Gene Hhal_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0487 
Symbol 
ID4711053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp555261 
End bp556406 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content66% 
IMG OID639854945 
Productflagellar motor switch protein FliM 
Protein accessionYP_001002076 
Protein GI121997289 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.10052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGC AGGATATCCT CAGCCAGGAC GAGATCGACG CGCTCCTCCA CGGGATCGAC 
GACGGCGACG TCGATACCGA GGAAGAAGAG GATTCCGGCG AGCTCCGGCC GTATACCTTT
ACCGCCGAGG AGCGCATTGT CCGGGGTCGG ATGCCGACCC TGGAGATGAT CAACGAGCGC
TTCGGGCGGC TGTTCCGCAT CGGCCTGTTC AACATGCTCC GTCGCACGCC GGAGGTCTCG
GTCACCGGCG TGGAGATGAT GAAGTTCGGC GAGTACGTCC ACACCCTGTT CGTGCCCACC
AGCCTGAACA TCATCCGCGT GCCGCCGCTG CGCGGCTCCG GGCTATTCGT CATCGACCCC
AAGCTGGTCT TCCTGGTGGT GGACAACTTC TTCGGCGGCG GCGGGCACTT TTACCTGAAG
GTGGAGGGGC GCGAGTTCAC GCCCACCGAG CAGCGGGTCA TCCGCCTGAT GCTCGACCAG
GCCTTCGACG ACCTGCGCGA GGCGTGGAAC CCGGTGCTGG GCGTGGACTT CGAGTACGTG
AACATGGAGG TCAACCCCCA GTTCGCCAAC ATCGTCAGCC CCACCGAGGT GGTGGTGGTC
AGCAAGTTTC ACGTCGAGCT CGACGGCGGC GGCGGGGATA TCCACGTCAC CCTGCCGTAC
ACCATGGTCG AGCCGATCCG CGAGATCCTC GACGCCGGCG TGCAGTCCGA TCGCAACGAC
GTCGACGACC GCTGGGCCAA GGCGCTGCGC GAGGAGATGA AGACCGCGCC GGTGACCCTG
CACAGCACCC TGGCTCGCTC CGAGATCACC CTGCGCGATC TGATGCACCT CAAGGCCGGC
GATGTCATCC CCATCGAGAT GCCCGAGCGG GTGGTGGTTG AGGTTGAGGA GGTGCCGGTC
TTCTACGGCA CCTACGGGGT GTGCGAAGGG AACGCCGCCC TGCGCATCGA CGAGAAGGTG
CAGGCGCCGG AGCGCGAGAC GCTGCTCCCG GAGCGCGATC AGGTCCGCCG CGAGGAGCGC
GAGCGGGACG ATGAGCCGGT GCAGCAGCGC ATCAACCGGA TCACCGCCGA GCAGCGCAGC
AGCGTCGCCG AGTCGGACGA GGCGCCGGAG CGCCCCCAGA GCAGCCACAG GGTGGATGAG
TCATGA
 
Protein sequence
MSQQDILSQD EIDALLHGID DGDVDTEEEE DSGELRPYTF TAEERIVRGR MPTLEMINER 
FGRLFRIGLF NMLRRTPEVS VTGVEMMKFG EYVHTLFVPT SLNIIRVPPL RGSGLFVIDP
KLVFLVVDNF FGGGGHFYLK VEGREFTPTE QRVIRLMLDQ AFDDLREAWN PVLGVDFEYV
NMEVNPQFAN IVSPTEVVVV SKFHVELDGG GGDIHVTLPY TMVEPIREIL DAGVQSDRND
VDDRWAKALR EEMKTAPVTL HSTLARSEIT LRDLMHLKAG DVIPIEMPER VVVEVEEVPV
FYGTYGVCEG NAALRIDEKV QAPERETLLP ERDQVRREER ERDDEPVQQR INRITAEQRS
SVAESDEAPE RPQSSHRVDE S