Gene Hhal_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0483 
Symbol 
ID4709318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp553123 
End bp553392 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content66% 
IMG OID639854941 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_001002072 
Protein GI121997285 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.564628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCGG AGCGGGCGAT TCAGCTGGGC ACCGATGCGC TGACCGTGGC CACGCTCCTG 
GCCGGCCCCA TCCTGCTGGC GGCGCTGATC ATCGGCCTGA TCGTCGGCAT GTTTCAGGCC
GCGACGCAGA TCAACGAGCA GACCCTCTCG TTCGTGCCCA AGCTGGTCGG CCTGGCGGTG
GTGCTGTTCC TGCTCACGCC GTGGATGACC CAGGTGCTGA CCGATTTCAC CGAAGGGCTC
ATCCGCAGCA TCCCCGAGAT CCTGCGCTGA
 
Protein sequence
MTPERAIQLG TDALTVATLL AGPILLAALI IGLIVGMFQA ATQINEQTLS FVPKLVGLAV 
VLFLLTPWMT QVLTDFTEGL IRSIPEILR