| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0479 |
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| Symbol | |
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| ID | 4709745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 547271 |
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| End bp | 549028 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639854938 |
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| Product | GTP-binding signal recognition particle |
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| Protein accession | YP_001002069 |
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| Protein GI | 121997282 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1419] Flagellar GTP-binding protein |
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| TIGRFAM ID | [TIGR03499] flagellar biosynthetic protein FlhF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.530078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATCA AGCGAATCTT CGCCGCCAAT ACCCGCGAGG CGCTGCGTAA GGTCAAGGAG
CAGCACGGCC CGGACGCCGT GGTCATCTCC TCGCGCAACG TCGATGGCGG CGTGGAGGTG
ATCTCGGCGG TGGACTACGA TGAGCGCGCC GTTCAGGCGG CGGCCCGCGC ACAAGATCCG
CGGGCGGCCG AGATCCCGCC CCTGGACGGG TCCCCGGGGC CGCGCCCCGG GGAGCCGGAT
CTGCCTGCGG CCGGCGGTGA GCCCGCCGGG GAGGCCGGGG AGGCCGGTGA GACCGAGGAT
GAGGCCGGCC GCGCCCGCGA GGCGGCGCTG GCCCGGCTGC GCAGCCTGCG GGCGGGTGGC
GCCGTGGCCG ACGACGCCCT GCCGCAGCGC GAGGGCGGGT CGGCGTCCCG TGGGCGGCCG
CGCATCGATT CCGGCGCGGC GGAGCGGGCC CGCGCCAATG CCGCCGCCCA CCGCAGCGCC
GGTCAGGAGC GCGGCGCCGC CGCCGGGGGC GAACGCCGCG AGCCGCGGAT CGACCTGCGG
GTCGGTGGTG CCGACGAGGA CGCCGAACTC TTCGACGCCC TCAGCCGTGA GCACCAGGAG
GTGGAGCGCA AGCGCGCCGA GCAGCCGCGG CGCGATCCGG CGTCCCGCCC GGAGCGGAGT
CAAGGCGGCG TCGGCGGGGG CAGTGCCGGG CAGCGTCACC ACGGGCTCGG TGGCGCGGAG
CACGCTGCGG CGATAGGCGC CGCCGCGGAG GCGGCCAGCA GCGGCGCCCA GAGTGGTGCC
GCCGCGGCGA GCGGCGGCGG CGCAAGCCGG CGGCGTGTCG AGGAGGAGCC GGCCTTCCAG
GAGATGCGCG AGGAGATCCG TACCCTGCGC AGCCTCTTCG AGAACCAGCT CTCGCTGCTC
GAGTGGAATC GCATGGGCCA CCGCCACCCG GCGCGGGCCG CGGTGATCAA GCGGCTTACC
GACCTCGGTA TGGGTACCGA GGTCAGTCGT AAGCTGGCCG ATCACATCGG CGGCGACGAG
AACCCCGACA CCGCCTTCCG CAAGGCCCTG GCCCTGATCG CCCGGCATCT GCCCATCGCC
GGTGATCAGA TCGTCGATCG CGGCGGGGTC TACGCCCTGG TCGGCCCCAC CGGCGTCGGC
AAGACCACCA CGGTGGCCAA GCTGGCGGCG CGCTACGCCC TGCGTCACGG CCGCGAGCAG
GTGGCGCTGG TCAGCACCGA CAACTACCGG GTCGGCGCCC AGGATCAGCT GCTCACCTAT
GCCCGTATCC TCGACGTCCC GGTCTACACC GCCACCAATC GTCACGAGCT GCGCACGATT
GTCGACGATT TGATGGATCG TGGTCTGGTG CTCATCGACA CGGTGGGCAT GAGTCAGCGC
GATGTCCGCC TGGCTGAGCA GTTCAAGACC CTGGGCAGCG CGGAGGGCCT GGTGAAGACG
TACCTGGTGC TCTCGGCGGC CACGCAGATG GCGACCCTGA CCGAATCGGT CAGCGCCTTC
GCCGGCGCCG AGCCGGTGGG CTGCATCTTC ACCAAGGTCG ACGAGGCCTC GAGTCTGGGC
GGGGCGATGA CCTGCGCCCT GCGCACCAAG CTGCCCATCG CCTACCTGGC CGTGGGCCAG
CGGGTGCCGG AAGACCTCCA GGCGGCCAGG GGTGATACAC TCGTCCACCG GGCATGTGCC
CTGCTGGACG AGCACGTCCA GGAGGCGGAT GAGGAAGCCC TGGCATTGGC GCTCGGTGGG
GGAGGCGCAT GTTCCTGA
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| Protein sequence | MRIKRIFAAN TREALRKVKE QHGPDAVVIS SRNVDGGVEV ISAVDYDERA VQAAARAQDP
RAAEIPPLDG SPGPRPGEPD LPAAGGEPAG EAGEAGETED EAGRAREAAL ARLRSLRAGG
AVADDALPQR EGGSASRGRP RIDSGAAERA RANAAAHRSA GQERGAAAGG ERREPRIDLR
VGGADEDAEL FDALSREHQE VERKRAEQPR RDPASRPERS QGGVGGGSAG QRHHGLGGAE
HAAAIGAAAE AASSGAQSGA AAASGGGASR RRVEEEPAFQ EMREEIRTLR SLFENQLSLL
EWNRMGHRHP ARAAVIKRLT DLGMGTEVSR KLADHIGGDE NPDTAFRKAL ALIARHLPIA
GDQIVDRGGV YALVGPTGVG KTTTVAKLAA RYALRHGREQ VALVSTDNYR VGAQDQLLTY
ARILDVPVYT ATNRHELRTI VDDLMDRGLV LIDTVGMSQR DVRLAEQFKT LGSAEGLVKT
YLVLSAATQM ATLTESVSAF AGAEPVGCIF TKVDEASSLG GAMTCALRTK LPIAYLAVGQ
RVPEDLQAAR GDTLVHRACA LLDEHVQEAD EEALALALGG GGACS
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