Gene Hhal_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0473 
Symbol 
ID4711472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp540937 
End bp542124 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content73% 
IMG OID639854932 
Productchemotaxis-specific methylesterase 
Protein accessionYP_001002063 
Protein GI121997276 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCATTC GGGTTCTGGT GGTCGACGAT TCCGGTTTCT TCCGCCGGCG CATCCGCGCC 
ATGGTCGAGC AGGACCCGCG TCTCGAGGTC TGCGGCGAGG CTGCCGACGG CCGACAGGCC
GTGTCGCTGG CCCAGCGGCT GTGCCCGGAC GTGATCACCA TGGACATCGA GATGCCCGAA
CTCGACGGCA TCTCGGCGGT CCGCGAGATC ATGCAGCGCC GACCCACCCC GGTGCTGATG
TTCTCCTCGC TCACCCACGA GGGGGCTCGG GCGACCATCG AGGCGCTTGA AGCCGGCGCC
GCCGATTTCA TCCCCAAGCG GTTCGCCGAC ATCTCCGGCG ACATGGAGGC GGTCCAGCGT
CAGCTCTGCG GGCGGCTGGT CGAGCTCGGC GGCGGCCGGC GCGGGGGTGG CCCCCGGGGC
GGGCAGGCTG CGGTTTCCCA GGCCCGGGCG CCGGCGGCTG CGCCTCCGGC TACCGGCGAG
GCCCCGACGC CCAGCCGCAC CCCGCCGGCG GCTCGCTCAC GCCCGGAAGG CGAAGCCGCG
GCGCGGGCGC CGGCCCCTGC AGCGCAGCCG GCCCCGGCCA CTGGGGCGCG GCGCGCCGGC
CGCGGCGGTC CGCGCCTGGC CGATCTGCAG GCGGTGGTCA TCGGGTGCTC CACCGGCGGG
CCGGTGGCGC TGCAGCGGGT GCTGACCCGG CTACCGGCGA GCTTCCCGGT GCCCGTGCTG
GTGATCCAGC ATATGCCGGC CTCCTTCACC CCGGCCTTCG CCGAGCGCCT CAATGAGCTC
TGCCAGGTGC AGGTCCGCGA GGCGGATGAC GACGACCTGC TGCGCCCTGG CGAGGTGCTC
CTCGCCCCCG GCGGCCGGCA CCTGGGGGTA CGCGGGCGCA GCGGCGCGCT CAGTGTCTAC
ACCTATGAGG GGCAGAGCGA CCACCACTAC AAGCCGAGCG TCGATATTGC CTTCAGCGAG
CTGGCCCGGC TGGCCCCGGC AGGGGTGCTG GGGATCGTGC TCACTGGTAT GGGCTCGGAC
GGGGCCAAGG GGGCCAAGCT GCTCAAGGAC AACGGTTGCT GGGTGTGGAG CCAGGACGAG
GCGAGCAGCG TCATCTACGG CATGCCAGCG GCGGTGGCCA AGGCCGGGCT CAGTGATCAG
GTGCTGCCCC TCGAGCGGAT CGGAGACGAA CTCGCCCGCC TTCGCTAG
 
Protein sequence
MSIRVLVVDD SGFFRRRIRA MVEQDPRLEV CGEAADGRQA VSLAQRLCPD VITMDIEMPE 
LDGISAVREI MQRRPTPVLM FSSLTHEGAR ATIEALEAGA ADFIPKRFAD ISGDMEAVQR
QLCGRLVELG GGRRGGGPRG GQAAVSQARA PAAAPPATGE APTPSRTPPA ARSRPEGEAA
ARAPAPAAQP APATGARRAG RGGPRLADLQ AVVIGCSTGG PVALQRVLTR LPASFPVPVL
VIQHMPASFT PAFAERLNEL CQVQVREADD DDLLRPGEVL LAPGGRHLGV RGRSGALSVY
TYEGQSDHHY KPSVDIAFSE LARLAPAGVL GIVLTGMGSD GAKGAKLLKD NGCWVWSQDE
ASSVIYGMPA AVAKAGLSDQ VLPLERIGDE LARLR