Gene Hhal_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0470 
Symbol 
ID4711537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp538659 
End bp539156 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content63% 
IMG OID639854929 
Productputative CheW protein 
Protein accessionYP_001002060 
Protein GI121997273 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.126414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTACG AACAGGCACA GTACGAAGAC GATGCCGAAC TCGCTGAGGG GCCGACCTCC 
CAGTGGGTGA CGTTCAAGCT CGGCAACGAG CACTACGGCA TCAACGTGAT GCAGGTCCAG
GAGGTCCTGC CGCTGTCGGA GATCGCGCCG GTGCCGGGGG CCCCGGAGTT CGTCCTGGGG
ATCATCAATC TGCGTGGCAA AGTGGTGACG GTGATCGACA CGCGGCTGCG CTTTGGCATG
AAGCCTCGGG AGGCGGACAA GCAGAGTCGG ATCATTGTCA TGGAGGTGGC GGAGAACGTC
GCCGGTATCC TGGTCGACAG CGTCGATGAG GTGGCCAGCG TTCGCGAGGC GCAGATCGAT
ACGGCGCCGA ACGTCGGCAA TGAGGAATCG TCGCGCTACA TCTATGGGGT GGTCAGTCGC
GAGGACGGGC TGCTGATCCT GGTTGATGCC AACAAGCTCC TGACCGAGGA CGAGTGGCAG
GAGGTGGCCG CCCTCTGA
 
Protein sequence
MAYEQAQYED DAELAEGPTS QWVTFKLGNE HYGINVMQVQ EVLPLSEIAP VPGAPEFVLG 
IINLRGKVVT VIDTRLRFGM KPREADKQSR IIVMEVAENV AGILVDSVDE VASVREAQID
TAPNVGNEES SRYIYGVVSR EDGLLILVDA NKLLTEDEWQ EVAAL