Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0470 |
Symbol | |
ID | 4711537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 538659 |
End bp | 539156 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639854929 |
Product | putative CheW protein |
Protein accession | YP_001002060 |
Protein GI | 121997273 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.126414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTACG AACAGGCACA GTACGAAGAC GATGCCGAAC TCGCTGAGGG GCCGACCTCC CAGTGGGTGA CGTTCAAGCT CGGCAACGAG CACTACGGCA TCAACGTGAT GCAGGTCCAG GAGGTCCTGC CGCTGTCGGA GATCGCGCCG GTGCCGGGGG CCCCGGAGTT CGTCCTGGGG ATCATCAATC TGCGTGGCAA AGTGGTGACG GTGATCGACA CGCGGCTGCG CTTTGGCATG AAGCCTCGGG AGGCGGACAA GCAGAGTCGG ATCATTGTCA TGGAGGTGGC GGAGAACGTC GCCGGTATCC TGGTCGACAG CGTCGATGAG GTGGCCAGCG TTCGCGAGGC GCAGATCGAT ACGGCGCCGA ACGTCGGCAA TGAGGAATCG TCGCGCTACA TCTATGGGGT GGTCAGTCGC GAGGACGGGC TGCTGATCCT GGTTGATGCC AACAAGCTCC TGACCGAGGA CGAGTGGCAG GAGGTGGCCG CCCTCTGA
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Protein sequence | MAYEQAQYED DAELAEGPTS QWVTFKLGNE HYGINVMQVQ EVLPLSEIAP VPGAPEFVLG IINLRGKVVT VIDTRLRFGM KPREADKQSR IIVMEVAENV AGILVDSVDE VASVREAQID TAPNVGNEES SRYIYGVVSR EDGLLILVDA NKLLTEDEWQ EVAAL
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