| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0467 |
|---|
| Symbol | |
|---|
| ID | 4711546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 535421 |
|---|
| End bp | 536530 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639854926 |
|---|
| Product | ribulose-bisphosphate carboxylase |
|---|
| Protein accession | YP_001002057 |
|---|
| Protein GI | 121997270 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCTGCCG AAACCCTGCG CGTGACCTAC TACCTGACCT GCCGCCCCGG CGAAGATCCC
CACGACAAGG CCAAGGGCAT CGCGCTCGAG CAGAGCGCCG AGCTGCCCTC GCGCTGCATC
CCGGAGCACG TCTACGACGA CGTGGTGCCG ACGATCCAGG AGCTAACAGC GCTGGAGGAC
GGCCGCCACC GCCTGGTTCT CGACTTCCCG GAGGCGATCA CCGGCCTCGA ACCGACCCAG
CTGATCAACA ACCTGTTCGG CAATATCTCG CTCAAGAGCG GGATCCGCCT GGCCGACGTG
GAGTGGACGC CCAACCTCCT GCGCGCCCTG GGCGGGCCGC GCTACGGGAC CGCCGGCGTA
CGCGAGATGC TCGGCATCGG CGAGCGGCCG ATCAGCTCCA CGGCGCTCAA ACCCCTGGGC
CTGGACACCG CCACGCTGGC GGGCTTCTGC GCCGACTTTG CCCGCGGCGG CATCGACCTG
ATCAAAGACG ACCACGGGCT CTGCGACCAG GACACCTCCC GCTTCGTCGA TCGCGTGCAG
GCCTGCCAGC GGGCGGTCAA CGAGGTCAAT GCCGAGACCG GCGGCCGCTC GCTCTACCTA
CCCAATGTCA CCGGCCCCCG CTGGGAGCTG GACAAGCGCC TCGACGCCGC GCAGGAGGCC
GGCTGCAAGG CGGTCCTCAT CTGCCCCTTC CTCACCGGTC TCGATGCGCT GATCTGGGCC
CGCGAACGCT ACGACATGGC CCTGATGGCC CACCCGGCCT TCGCCGGCGC GGTGGCCGGC
GCCGAGCACG GCATCGACCC CGCCCTGCTG CTCGGCGAGA TCACCCGCCT GTTCGGTGCG
GATATGGTGG TCTACACCAA CGCCGAGGGG CGCTTCCCCA CTTACGATCA GGCGCTGTGC
GACCGCATCA ACGACCGGCT GCGCCGCCCC CTGGGCGACA TCCGCCCGGC TCTGCCCACG
CCGGGCGGCG GTGTGGACGC CGCACGCGCG CCGTATTGGG CCGAGCGCTA CGGGCCCGAC
GTGGTACTGC TGATCGGTGG CAGCCTCTAC GCCCAGGGCG ATCGGGCCGC CGCCGCACGC
CGTCTGCAGG ATGTGGTAGA GGGTCAGTAA
|
|---|
| Protein sequence | MSAETLRVTY YLTCRPGEDP HDKAKGIALE QSAELPSRCI PEHVYDDVVP TIQELTALED
GRHRLVLDFP EAITGLEPTQ LINNLFGNIS LKSGIRLADV EWTPNLLRAL GGPRYGTAGV
REMLGIGERP ISSTALKPLG LDTATLAGFC ADFARGGIDL IKDDHGLCDQ DTSRFVDRVQ
ACQRAVNEVN AETGGRSLYL PNVTGPRWEL DKRLDAAQEA GCKAVLICPF LTGLDALIWA
RERYDMALMA HPAFAGAVAG AEHGIDPALL LGEITRLFGA DMVVYTNAEG RFPTYDQALC
DRINDRLRRP LGDIRPALPT PGGGVDAARA PYWAERYGPD VVLLIGGSLY AQGDRAAAAR
RLQDVVEGQ
|
|---|
| |