| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0463 |
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| Symbol | |
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| ID | 4711510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 530284 |
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| End bp | 533418 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639854922 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001002053 |
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| Protein GI | 121997266 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACTG TACAAACAAC CACATCTCCG GCGTACGCCG AACTCCACTG CCTGAGCGCC
TTCACCTTCC GCCGCGGCGC CTCGCAGCCC GAGGAGCTGG TCGCCCGGGC CGCACAACTG
GACTACCACG CCCTGGCCAT CACCGACGAG TGCTCGGTGG CCGGGGCCGT ACGCGCCTGG
CAGGCGGCAC GGAGCCACGG CCTGCACTTG ATCGTCGGCA CCGAACTGCG CCCGGCCGAT
GGCCCGCGGG TCGTCCTCCT CGCCCCCACC CGTCAGGCCT ACGGACAGCT CTGCGCCCTG
ATCAGCCTGG CCCGCGGCCG CGCGGCCAAG GGCGGCTACC ACCTCACCCG GGAGGACCTG
GACAGCGGCG CACCGGACTG CCTGGGGCTG CTCATCCCGG ACGCCCCCCA CCAGGAAGGG
ACCGAGACCG AGGCCCAGAC CCGCTGGTTC GCCCGCCGCT TTGCCGGACG CGGTTACCTG
GCGGTGGAAC TACTCGGCGG CCCCGACGAT GCCGCCCGCT GCCGGATGCT TGAGGCCCGT
GCCGCCGCCG CGGGCCTGCC GGCGGTCGCG GCCACCGGCG CCGAGATGCA CACCCGGGGC
CGCCGGGCCC TGCACGACAC CCTGACCGCC ATCCGCCACG GCCGCCCGGT CGCCGAGGTC
ACCGCCCACC TGGCCAGTAA CGGCGAGCAC CACCTGCGCC GGCGTCCGGC CCTGGCCGAA
CGCTACCCCC ACCACCTGCT CGCACAGAGC ACCGCCATCG CCGACCGCTG CACCTTCTCG
CTGGACGAGT TGCGCTACGA GTACCCCGAG GAAGTCGTTC CCGAGGGCAC GACACCGACG
GCACACCTGC GCCAGCTGGT CGAGACCGGG GCCCGCCGGC GCTATCCCGA CGGGGTGCCG
GCAGCCGTGC AGGCCGGCTA CGAACGCGAA CTGGCGATCA TTGCCGAGCT CGGCTACGAG
CACTACTTCC TGACCGTCCA CGATCTCGTC GCCTTCGCCC GCGGGCGGGG CATCCTCTGC
CAGGGGCGCG GCTCGGCGGC CAACTCCGTC GTCTGCTTCT GCCTGGGGAT CACCGAAGTG
GATCCGGCGC ACCAGTCGGT GCTCTTCGAG CGCTTCGTCT CCCGCGAACG TGGCGAGCCG
CCGGATATCG ACGTGGACTT CGAGCACCAC CGGCGCGAAG AGGTCATCCA GTACATCTAC
CAGCGCTACG GCCGCCACCG GGCCGCTCTG GCGGCCACGG TCATCGCCTA CCGGCCCCGC
TCGGCCGTGC GGGACGTGGC CAAGGCCCTG GGCCTGGAGC GCGAGAGCGT CGAGCGCCTG
GCCAAGGGGC TGCAGCCCTG GGACCACTCC GCCGCCAACG ACGAGCAGCT CCGCCAGGCC
GGGCTCAACC CCGACGGCCC CATTGCGCGC CGACTGCGGA TACTGGCCGG GGAGCTCCTC
GGTTTCCCGC GCCACCTCTC GCAGCACGTC GGCGGGTTTG TCATCGCCCG CTGCCCAATC
ACCGAGCTGG TACCGGTGGA ACCAGCCGCC ATGGACGGGC GCACGGTGAT CCAGTGGGAC
AAGGACGACC TGGAGGCGCT CGGACTGCTC AAGGTGGATG TCCTGGCCCT GGGCATGCTC
AGCGTCATCC GCCGCGCCTT CGAGCTCATC CACCACTGGC GCGGCCATGC CTGGACCCTG
GCCACTCTGC CGCCGGCCGA TCCGGCCACC TACGCCATGA TCCAGCGCGC TGACACCCTG
GGGGTCTTCC AGATCGAGTC GCGGGCGCAG ATGGCCATGC TGCCGCGGAT GCGCCCGCGC
TGCTTCTACG ACCTGGTCAT CGAGATCTCC ATCGTCCGCC CCGGCCCCAT CCAGGGCGAT
ATGGTCCACC CCTACCTGCG CCGGCGCGAG GGCAGCGAGC CGGTGGACTA CCCATCCGAG
GAGGTCCGTG GAGTTCTGGA GCGCACCCTC GGGGTACCGA TCTTCCAGGA GCAGGCCATG
GAGTTGGCCG TCGTGGCCGC CGGCTTCACC CCGGACGAGG CCGACCGGCT GCGTCGCTCC
ATGGCCGCCT GGCGCAAGAA GGGCGGACTG GCACCGCTGC GTGAGCGGCT CATCGAGGGG
ATGCGCGAGC GCGGCTACTC CAGCGCCTAC GCCGAACGCC TCTACCGGCA GATCGAGGGC
TTCGGCGAGT ACGGCTTCCC GGAGTCCCAC GCCGCCAGCT TCGCGCTGCT CGTCTACGCC
TCGGCCTGGC TCAAGTGCCA TGAGCCGGCG GCCTTCGCCG CCGCCCTGCT CAACAGCCAG
CCGATGGGCT TCTACGCCCC GGCGCAGATC ATCCGCGACA CCCGGGAGCA CGACGTGGCG
GTGCGCCCGG TGGACGTGCG CTTCAGCGAG CCGGCGTGCA CGCTCGAACC CCCGCAGCCG
CCGGACAGCC CATCAGGCGC CGGCTCGCAA CCGGCCCTCC GCCTGGGGCT GAACCAGATC
CGCGGCCTGT CCACCGCCGG CGCCGAGCGG ATCGCCGCCG CCCGCTCCCG GGCGCCCTTC
ACCGGGGTCA ACGACCTCAA GCGCCGCGCG CACCTGTCCC GGGCCGATAT TCACGCCCTG
GCCCGCGCCG ACGCGCTGCG CGGCATCGCC GGGCACCGCC GGGCGGCCAG CTGGGCAGCC
CTGGGCGCCG ACGAGGGGAC CGCCCTGATC CCTCCCCCGC CGGCCGAGGC CGGCCGACCG
AGCCTCGCCC CCGCCCGCGA GTCCCAGGCA GTCCTGGCCG ACTACGCCAG CACCGGCTTC
ACCCTGCGCC GCCATCCGCT CGCGTTCCTG CGCCGGCAGC TCCGGGCTCG GCGCTACCGC
AGTGCCGCCG AGCTCGCCAC CGCAGAGGAC GGCCGTTCGA TACGGGCTGC CGGGCTGGTG
ATCAACCGCC AGCGCCCCGG CTCGGCCGGG GGGATCACCT TCGTTACGCT GGAGGATGAG
ACCGGTCGGA TCAATCTGGT GGTGCGCCGC GCCACCGCCG AGGCCCAGTC CCGCCCCTTG
CTCGAGGCCC GGCTTCTGGG GGTGGCCGGC ACCTGGCAGT ACCGGCACGG CGTCGGGCAC
CTGATCGCCG GCCGGCTGGA GGATCTGTCG GGACTGATCG GCGAACTGGA CGTCCGCTCC
CGCGACTTCG GCTAA
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| Protein sequence | MTTVQTTTSP AYAELHCLSA FTFRRGASQP EELVARAAQL DYHALAITDE CSVAGAVRAW
QAARSHGLHL IVGTELRPAD GPRVVLLAPT RQAYGQLCAL ISLARGRAAK GGYHLTREDL
DSGAPDCLGL LIPDAPHQEG TETEAQTRWF ARRFAGRGYL AVELLGGPDD AARCRMLEAR
AAAAGLPAVA ATGAEMHTRG RRALHDTLTA IRHGRPVAEV TAHLASNGEH HLRRRPALAE
RYPHHLLAQS TAIADRCTFS LDELRYEYPE EVVPEGTTPT AHLRQLVETG ARRRYPDGVP
AAVQAGYERE LAIIAELGYE HYFLTVHDLV AFARGRGILC QGRGSAANSV VCFCLGITEV
DPAHQSVLFE RFVSRERGEP PDIDVDFEHH RREEVIQYIY QRYGRHRAAL AATVIAYRPR
SAVRDVAKAL GLERESVERL AKGLQPWDHS AANDEQLRQA GLNPDGPIAR RLRILAGELL
GFPRHLSQHV GGFVIARCPI TELVPVEPAA MDGRTVIQWD KDDLEALGLL KVDVLALGML
SVIRRAFELI HHWRGHAWTL ATLPPADPAT YAMIQRADTL GVFQIESRAQ MAMLPRMRPR
CFYDLVIEIS IVRPGPIQGD MVHPYLRRRE GSEPVDYPSE EVRGVLERTL GVPIFQEQAM
ELAVVAAGFT PDEADRLRRS MAAWRKKGGL APLRERLIEG MRERGYSSAY AERLYRQIEG
FGEYGFPESH AASFALLVYA SAWLKCHEPA AFAAALLNSQ PMGFYAPAQI IRDTREHDVA
VRPVDVRFSE PACTLEPPQP PDSPSGAGSQ PALRLGLNQI RGLSTAGAER IAAARSRAPF
TGVNDLKRRA HLSRADIHAL ARADALRGIA GHRRAASWAA LGADEGTALI PPPPAEAGRP
SLAPARESQA VLADYASTGF TLRRHPLAFL RRQLRARRYR SAAELATAED GRSIRAAGLV
INRQRPGSAG GITFVTLEDE TGRINLVVRR ATAEAQSRPL LEARLLGVAG TWQYRHGVGH
LIAGRLEDLS GLIGELDVRS RDFG
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