Gene Hhal_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0442 
Symbol 
ID4711493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp506878 
End bp508338 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content69% 
IMG OID639854901 
Productanion transporter 
Protein accessionYP_001002032 
Protein GI121997245 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTACGA GCACGAACCC GAGCGCTGCG CGCAGACGCT GGATTGGCCT GATCGGCGGC 
CCCCTGGCCG CCGCGGCCAT GCTGCTCGCC GGGCCGCCGG CCGGACTGGA GCCGGAGGCC
TGGTATGTGG CGGCGCTCAC CGTGCTCATG GCCACCTGGT GGGTGAGCGA GGCCTTGCCC
ATCGCGGCCA CCGCGCTGCT GCCGGCCGTC GCCCTGCCGT TGCTCGGCGT CGCCAGCCCC
GAGCAGGCGA TGGCCTCCTA CGCCAATCCG ATGATCTTCC TGTTCCTCGG CGGGTTCCTG
ATCGCCATGG CGATCCAGCG CTGGGGGCTG CACCGACGGA TCGCGCTGCT CATCCTCTCG
GCCACCGGCG GGCGTGACGA TCTCCTGGTG GCCGGGTTCA TGGGCGCCAC CGCCATGCTC
TCCATGTGGG TGAGCAATAC CGCCACGGCG GCGATGATGC TGCCCATCGG CCTGTCGGTC
ATCAGCCTGG TGGAGACCAG CAGCGGCAAA ACGGATCGCC ACTTCACCCT GGCACTGCTG
CTAGGCATTG CCTTCGGCGC CAACATCGGC GGTCTCGGAA CCCTGATCGG CACCCCGCCG
AACGCTTTCC TGGCCGGCTA CATGGGCGAT CGCTTCGATA TCCAGATCGG CTTTGCGCAG
TGGATGGTCG TCGGCGTGCC GGTCTCCGCC ATCATGCTGG TTCTGGCCTG GTGGGTGCTG
ACGCGCTGGG TGTTTCCCCT GCCCGGCCAG GCGATCGAAG GCGTTGGCGA GCTGATCGAG
CAGGAGCGCC GGCAGATCGG GCCCATGCAG CGCACCGAGC GCCGGGTGGC GGTGGTCTTC
GTGTTGACTG CGCTGGCTTG GGTGATGCGC CCCTGGTTGG AGAGCGTCCT GCCTGGCTCG
GTGGCGATCA GCGACGCCGG CATTGCGCTG CTCGGGGCCC TGGCCCTGTT CCTGGTGCCG
GCCGATGTGC GCCGCCTGAA GTTCCTCCTC GACTGGGAAG ACACCCGCGG TCTGCCCTGG
GGGGTGCTGG TGCTGGTCGG TGGTGGCCTG GCCCTGGGCG TGGCCATCGA CGAGAGCGGC
CTGGCTGGTG CCATTGCGGC ACTGCTCAGT GGCATGGGGA GTTGGCCGGC GCCGCTGCTG
GTGCTCTCGG TGGCGATACT GGCGGCCCTG ATGAGCCACG TGACCAGCAA TACCGCAACG
GCCGCCACGC TGCTGCCGCT GGTTACCTCC CTGGCGCTGG CCATCGATAT CCACCCGCTA
TTACTCGGTG TACCGGTGGC CCTGGCCGCC TCGGCGGCGT TCATGCTGCC GGTGGCGACG
CCGCCCAACG CCATCGTCTT CGGCAGCGAT CGCATCACCG TACCGGACAT GGTGCGTGCC
GGGGCGCTGC TGACCTTCGC CGGTGCGGGT ATCGCCACGC TGGCTGCCTT CCTCCTGGCC
CCTTGGGTGC TTGGTTTCTA A
 
Protein sequence
MSTSTNPSAA RRRWIGLIGG PLAAAAMLLA GPPAGLEPEA WYVAALTVLM ATWWVSEALP 
IAATALLPAV ALPLLGVASP EQAMASYANP MIFLFLGGFL IAMAIQRWGL HRRIALLILS
ATGGRDDLLV AGFMGATAML SMWVSNTATA AMMLPIGLSV ISLVETSSGK TDRHFTLALL
LGIAFGANIG GLGTLIGTPP NAFLAGYMGD RFDIQIGFAQ WMVVGVPVSA IMLVLAWWVL
TRWVFPLPGQ AIEGVGELIE QERRQIGPMQ RTERRVAVVF VLTALAWVMR PWLESVLPGS
VAISDAGIAL LGALALFLVP ADVRRLKFLL DWEDTRGLPW GVLVLVGGGL ALGVAIDESG
LAGAIAALLS GMGSWPAPLL VLSVAILAAL MSHVTSNTAT AATLLPLVTS LALAIDIHPL
LLGVPVALAA SAAFMLPVAT PPNAIVFGSD RITVPDMVRA GALLTFAGAG IATLAAFLLA
PWVLGF