Gene Hhal_0436 details

Gene Information

• Locus tag: Hhal_0436
• ID: 4709170
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 502634
• End bp: 503299
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639854895
• Product: putative transmembrane anti-sigma factor
• Protein accession: YP_001002026
• Protein GI: 121997239

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGAGC GGACCATGGA TTGCCGGGAG TGTCGCGCAA GCCTGTTGGA GCTGGAGGCG 
GGGGAGCTGG ACAGCGCCCG GGCGGAGCGC TGCCACGCGC ACCTGGCAGC CTGCCCGGCG 
TGCCGGGCCT GGCACCACGA TGGTCTCCGC CTCCGTCGGC ACCTGGCCAG CCTGGATCGC 
CGGGATGCGG TCTCGCCCGG CTGGGTGGCG GCGCAACTGC GTCGGGCGCG AGTCGAGCAC 
ACCACCGGGT CCACGGTCCG GCAGCGCCTG GTGGCCGGCG TGGCGGCGGT GGCGATCCTC 
GCCGGAGGCG GGTTGGCCCT CTACGACCGG CAGCCTACGC ATCCAGAGCC ACCGCTGGCT 
GAAACGGGAG AGGGCGAGGT CCAGGAGGTC CGGTTGGCCA TTGACGCCGA GCGGCGTATG 
GAGGGGGTCC GGTTCCACGT CGAGGTCCCC GACGGCTTCG AGTTGGCGGG CCAACCCTCC 
CGGCGGCTGA TCAGCTGGGA GGGTGATCTG GAGCCGGGCG CCAACCGGTT GACCCTCCCG 
GTGCGCGGCG TGCCAGGGGC AGGGATCGAG GAGGGGGAAT TGGTGACCCG CATCGAGCAC 
GAGGGCCGTT CCCGGGAACT GCGGTTGCCG GTCACCCTCG CGCAGCGCCG CGAAAGTGAG 
TCTTGA 

 

Protein sequence

MTERTMDCRE CRASLLELEA GELDSARAER CHAHLAACPA CRAWHHDGLR LRRHLASLDR 
RDAVSPGWVA AQLRRARVEH TTGSTVRQRL VAGVAAVAIL AGGGLALYDR QPTHPEPPLA 
ETGEGEVQEV RLAIDAERRM EGVRFHVEVP DGFELAGQPS RRLISWEGDL EPGANRLTLP 
VRGVPGAGIE EGELVTRIEH EGRSRELRLP VTLAQRRESE S