| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0413 |
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| Symbol | |
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| ID | 4711540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 481178 |
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| End bp | 481681 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639854872 |
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| Product | DNA mismatch endonuclease vsr |
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| Protein accession | YP_001002005 |
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| Protein GI | 121997218 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.23201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACA GGCTCTCTCC GGAACATCGC AGCCGGGTAA TGAGCCGGGT GCGCGGGCAC
GACACGAAGC CCGAGCTCGT CCTGCGCCGC GCGCTCCATG CGCGGGGCTT CCGATACAGA
CTCCATGTAC GCGACCTCCC CGGATGCCCC GATCTCGTTT TCCCTCGGTA TTCGGCGGTG
GTGTTCGTTC ACGGATGTTT CTGGCATGGG CATGACTGCC ACCTTTTCCG CATGCCCTCA
ACCCGCGAGG AGTTCTGGGA AAAAAAGATC GGACGCAATC GGGAACGCGA CCGGAAAAAT
CGGGCCGAAC TGCTTGATCG CGGGTGGCGC GTCTTGGAAG TTTGGGAATG CGCGATGAGA
GGGAAGGATC GTCTTCCATC CGGTGAAATG CTTGAAAGGG TGGAGACATG GCTGACCGGC
CGTACAGTTA CCCATGAGAT CCGCGGTCTT GGGGGGCGGC ACCCGGGGGC GAACGACGAC
AGTATTTATG GGGAGCAGGC GTAG
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| Protein sequence | MSDRLSPEHR SRVMSRVRGH DTKPELVLRR ALHARGFRYR LHVRDLPGCP DLVFPRYSAV
VFVHGCFWHG HDCHLFRMPS TREEFWEKKI GRNRERDRKN RAELLDRGWR VLEVWECAMR
GKDRLPSGEM LERVETWLTG RTVTHEIRGL GGRHPGANDD SIYGEQA
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