Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0403 |
Symbol | |
ID | 4711438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 470787 |
End bp | 471566 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639854865 |
Product | OsmC family protein |
Protein accession | YP_001001998 |
Protein GI | 121997211 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCACCC AGCGTTTAGA TTTCCCCGGT GCCGAGGGCC ACACGCTCTC GGCCCGGCTC GACGAGCCCG ATGGAGCGCC GCTGGCCTAC GCGCTGTTCG CCCACTGCTT TACCTGCGGC AAGGACATTA AAGCGGCTTC GCGGCTGGCG GCGGCCCTCG CGGAGGAGGG GATCGCCACC CTCCGCTTCG ACTTCACTGG CCTCGGCGAC AGCGAAGGGG ATTTTGGCAA TACCGGCTTC CGGTCCAATG TCGCCGACCT GATCGCGGCC GCGGGGTTTA TGCGTGACTC GGGGCGGCCG GTGAGGATCA TGGTCGGCCA TAGCCTCGGT GGTGCAGCAG TCATCGCCGC GGCCGGCGAC ATACCGGAGT GCCGTGCGGT GTGCTCGATT GGTGCGCCGT TCGAGGCTCA TCATGTCCTT GAGCACCTCG GTGACAAGCG CGAGGAGATC GAGCGCAGTG GCGAGGCCGA GGTCAACCTG GGCGGTCAAA CCTTCCGCAT CGGCCGTTCA TTCATCACGG AGACGCTCAA CCACGACCAG GCCAGCCGGA TTGCGGACCT GCGCCGCCCG TTGCTGGTTA TGCACGCCCC CCTCGATGAG GTCGTGCCGG TGCGCGAGGC CCGGCGGATC TTTGAGACCG CCAAGCACCC CAAGAGCTAT ATCTCCCTCG ACGATGCCGA TCATCTGCTG ACCCGGGCAG CGGATGCCCG TTACGCCGCG ACACTGATCG CCGCCTGGGC GGCCCGCTAC CTGCCCGAGG CGGAGCAGGG AGGGGGCTGA
|
Protein sequence | MRTQRLDFPG AEGHTLSARL DEPDGAPLAY ALFAHCFTCG KDIKAASRLA AALAEEGIAT LRFDFTGLGD SEGDFGNTGF RSNVADLIAA AGFMRDSGRP VRIMVGHSLG GAAVIAAAGD IPECRAVCSI GAPFEAHHVL EHLGDKREEI ERSGEAEVNL GGQTFRIGRS FITETLNHDQ ASRIADLRRP LLVMHAPLDE VVPVREARRI FETAKHPKSY ISLDDADHLL TRAADARYAA TLIAAWAARY LPEAEQGGG
|
| |