Gene Hhal_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0403 
Symbol 
ID4711438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp470787 
End bp471566 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID639854865 
ProductOsmC family protein 
Protein accessionYP_001001998 
Protein GI121997211 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCC AGCGTTTAGA TTTCCCCGGT GCCGAGGGCC ACACGCTCTC GGCCCGGCTC 
GACGAGCCCG ATGGAGCGCC GCTGGCCTAC GCGCTGTTCG CCCACTGCTT TACCTGCGGC
AAGGACATTA AAGCGGCTTC GCGGCTGGCG GCGGCCCTCG CGGAGGAGGG GATCGCCACC
CTCCGCTTCG ACTTCACTGG CCTCGGCGAC AGCGAAGGGG ATTTTGGCAA TACCGGCTTC
CGGTCCAATG TCGCCGACCT GATCGCGGCC GCGGGGTTTA TGCGTGACTC GGGGCGGCCG
GTGAGGATCA TGGTCGGCCA TAGCCTCGGT GGTGCAGCAG TCATCGCCGC GGCCGGCGAC
ATACCGGAGT GCCGTGCGGT GTGCTCGATT GGTGCGCCGT TCGAGGCTCA TCATGTCCTT
GAGCACCTCG GTGACAAGCG CGAGGAGATC GAGCGCAGTG GCGAGGCCGA GGTCAACCTG
GGCGGTCAAA CCTTCCGCAT CGGCCGTTCA TTCATCACGG AGACGCTCAA CCACGACCAG
GCCAGCCGGA TTGCGGACCT GCGCCGCCCG TTGCTGGTTA TGCACGCCCC CCTCGATGAG
GTCGTGCCGG TGCGCGAGGC CCGGCGGATC TTTGAGACCG CCAAGCACCC CAAGAGCTAT
ATCTCCCTCG ACGATGCCGA TCATCTGCTG ACCCGGGCAG CGGATGCCCG TTACGCCGCG
ACACTGATCG CCGCCTGGGC GGCCCGCTAC CTGCCCGAGG CGGAGCAGGG AGGGGGCTGA
 
Protein sequence
MRTQRLDFPG AEGHTLSARL DEPDGAPLAY ALFAHCFTCG KDIKAASRLA AALAEEGIAT 
LRFDFTGLGD SEGDFGNTGF RSNVADLIAA AGFMRDSGRP VRIMVGHSLG GAAVIAAAGD
IPECRAVCSI GAPFEAHHVL EHLGDKREEI ERSGEAEVNL GGQTFRIGRS FITETLNHDQ
ASRIADLRRP LLVMHAPLDE VVPVREARRI FETAKHPKSY ISLDDADHLL TRAADARYAA
TLIAAWAARY LPEAEQGGG