Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0394 |
Symbol | |
ID | 4711428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 459463 |
End bp | 460023 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639854857 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001001990 |
Protein GI | 121997203 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.509635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAGGCA CGAAACGAGA CACCCTGCTC GACACCGCCG AGCAGCTCTT CTACCGAGAG GGGTTCCACG CCACGGGTGT CGACCGGGTC ATCGCCGAGG CGGGCGTCGC CCGGATGACA CTCTACAACC ACTTCCCCTC GAAAGAGGCG CTGATCCAGG CGGTTCTCGC CCGTCGGTAC GAGCGCTATC TCGACGATCT GCGTAACGCC GCGGACCAGG CGGGGGCAGG TGATGCCGTC GGGGCGCTGA CCGAGGCGCA CTGCCGCTGG CTGGAGACGA CCTCGAACCG TGGCTGCATC GTGATCAAAG CCATCGGCGA GTTCGAGCAG CACCAGCCGG CCATTGCCGA GCAGGGGCGT CGGCTCAAGC GCGAGCTGCT CCAGGTCATC GGTGATGCGG TCTCCCGGGA CCGCTCGGCG AGCGATCCGC CCCTTGCCGA GCGCCTGCTG CTGGTGCTGG AGGGCGCCGA CGCGCTGGCG CCGGTCCTCG GTGCCGCCGC CGTGACCGAA CACCTGCGGG CCATCCTCCC CGCCGTACTC GCCAGCCGGA ACGAGGTATG A
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Protein sequence | MAGTKRDTLL DTAEQLFYRE GFHATGVDRV IAEAGVARMT LYNHFPSKEA LIQAVLARRY ERYLDDLRNA ADQAGAGDAV GALTEAHCRW LETTSNRGCI VIKAIGEFEQ HQPAIAEQGR RLKRELLQVI GDAVSRDRSA SDPPLAERLL LVLEGADALA PVLGAAAVTE HLRAILPAVL ASRNEV
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