Gene Hhal_0372 details

Gene Information

• Locus tag: Hhal_0372
• ID: 4709727
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 437840
• End bp: 438493
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639854835
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_001001968
• Protein GI: 121997181
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.83228
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTACTGA GCGACTGGCT ACTGCTGCTC ACCGTCTGCG CACTCGGGGC CATGACGCCG 
GGACCGAGCC TGGCAGTGGT GGTGCGCCAT AGCCTGAGCA GCGGCCGGCC GGCCGGACTC 
GCCGCAGCCG TGGCCCACGG GATCGGGGTC GGCGGGTACG CGGCCCTGAG CGTCGCCGGC 
CTGGCCGGGC TCCTCGCCGC ACACCCAACC CTGCTGGCCG CCGTGCAGGG CCTGGGGGCC 
GCGTATCTGG CCTGGCTAGC CGTGCAATCG GCCCGCCAGG CCCACTCGAG CGCCGCCGCC 
TCGGCCACGG CGCATCCCCA CTCCACCGCG TCGAGCGCAC CCCCCGGCAA CCGGATCCAG 
GCGGCGCGCG ACGGCTTCTT AATGGCATTG CTCAACCCGA AGATCGCCCT CTTCTTCCTG 
GCGATCTTCA GCCCGTTCAC CGACCCCGGG CAGGCGGCCT GGGAACAGGC CCTGATGGTG 
GCCGTCGCCG CCGGGGTCGA TATGGGGTGG TACGCCGCAG TCGCCACGCT GTTCGCCCTG 
CCCGTCTGGC GGGCGCGGCT TGCAGCCCGG CAACGGCTAC GCGAAGGCAT CTTTGCTGTC 
GTGCTGGGGA TGCTGGCGCT CTACACCGCC TGGGTCGCCT TGGGGAGCGT TTAA 

 

Protein sequence

MVLSDWLLLL TVCALGAMTP GPSLAVVVRH SLSSGRPAGL AAAVAHGIGV GGYAALSVAG 
LAGLLAAHPT LLAAVQGLGA AYLAWLAVQS ARQAHSSAAA SATAHPHSTA SSAPPGNRIQ 
AARDGFLMAL LNPKIALFFL AIFSPFTDPG QAAWEQALMV AVAAGVDMGW YAAVATLFAL 
PVWRARLAAR QRLREGIFAV VLGMLALYTA WVALGSV